RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 ASIPP42127 132 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 PHEXP78562 749 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 EWSR1Q01844 656 aaKnown RBP eCLIP5.59□□□□□ -1.51
SSXP3-201ENST00000442971 CRYMQ14894 314 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 KRT72Q14CN4 511 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 CPSF6Q16630 551 aaKnown RBP eCLIP5.59□□□□□ -1.51
SSXP3-201ENST00000442971 DEFB136Q30KP8 78 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 TMEM177Q53S58 311 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 RBM20Q5T481 1227 aaKnown RBP5.59□□□□□ -1.51
SSXP3-201ENST00000442971 GRHL2Q6ISB3 625 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 KATNAL2Q8IYT4 538 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 CMTM4Q8IZR5 234 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 OSR2Q8N2R0 312 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 TMEM99Q8N816 258 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 OR8U1Q8NH10 309 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 TRPC4APQ8TEL6 797 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 PHLDA1Q8WV24 401 aaPredicted RBP5.59□□□□□ -1.51
SSXP3-201ENST00000442971 TM4SF18Q96CE8 201 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 MMADHCQ9H3L0 296 aaPredicted RBP5.59□□□□□ -1.51
SSXP3-201ENST00000442971 TCF7L2Q9NQB0 619 aa5.59□□□□□ -1.51
SSXP3-201ENST00000442971 PSMB11A5LHX3 300 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 M0R2N4 97 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 UPK1AO00322 258 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 SURF4O15260 269 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 SEMA3DO95025 777 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 KCNK2O95069 426 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 UBL3O95164 117 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 HTR3BO95264 441 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 ECDO95905 644 aaPredicted RBP5.58□□□□□ -1.52
SSXP3-201ENST00000442971 COMTP21964 271 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 CENPAP49450 140 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 KLHL26Q53HC5 615 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 MTX3Q5HYI7 312 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 HP1BP3Q5SSJ5 553 aaPredicted RBP5.58□□□□□ -1.52
SSXP3-201ENST00000442971 MBNL2Q5VZF2 373 aaKnown RBP5.58□□□□□ -1.52
SSXP3-201ENST00000442971 TMEM225Q6GV28 225 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 ZNF813Q6ZN06 617 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 PAGE2Q7Z2X7 111 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 ZDHHC13Q8IUH4 622 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 TCAIMQ8N3R3 496 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 Q8N7P7 452 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 OR6Y1Q8NGX8 325 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 OR4Q3Q8NH05 313 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 SLC35G2Q8TBE7 412 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 KLF14Q8TD94 323 aaPredicted RBP5.58□□□□□ -1.52
SSXP3-201ENST00000442971 TMEM234Q8WY98 164 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 OR2V2Q96R30 315 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 THUMPD3Q9BV44 507 aaKnown RBP5.58□□□□□ -1.52
SSXP3-201ENST00000442971 CCDC106Q9BWC9 280 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 SHCBP1LQ9BZQ2 653 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 TUBA4BQ9H853 241 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 ISYNA1Q9NPH2 558 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 CTPS2Q9NRF8 586 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 ACER3Q9NUN7 267 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 VNN3Q9NY84 501 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 MDFICQ9P1T7 246 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 SIRT4Q9Y6E7 314 aaPredicted RBP5.58□□□□□ -1.52
SSXP3-201ENST00000442971 AGRNO00468 2067 aa5.58□□□□□ -1.52
SSXP3-201ENST00000442971 VGLL3A8MV65 326 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 HDAC3O15379 428 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 AKR7A3O95154 331 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 LPLP06858 475 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 PATE4P0C8F1 98 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 ARSBP15848 533 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 MPIP34949 423 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 ZNF45Q02386 682 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 TGFBIQ15582 683 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 NCR3LG1Q68D85 454 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 SFRP4Q6FHJ7 346 aaPredicted RBP5.57□□□□□ -1.52
SSXP3-201ENST00000442971 TMEM107Q6UX40 140 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 LRIG3Q6UXM1 1119 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 LCNL1Q6ZST4 164 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 HDXQ7Z353 690 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 OR2L13Q8N349 312 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 MMGT1Q8N4V1 131 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 ZNF614Q8N883 585 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 L3MBTL4Q8NA19 623 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 C19orf18Q8NEA5 215 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 EXOSC8Q96B26 276 aaKnown RBP5.57□□□□□ -1.52
SSXP3-201ENST00000442971 FAIM2Q9BWQ8 316 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 C1QTNF3Q9BXJ4 246 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 FN3KQ9H479 309 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 ELOVL6Q9H5J4 265 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 EGLN3Q9H6Z9 239 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 DDX18Q9NVP1 670 aaKnown RBP5.57□□□□□ -1.52
SSXP3-201ENST00000442971 TBCCD1Q9NVR7 557 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 TMCC3Q9ULS5 477 aa5.57□□□□□ -1.52
SSXP3-201ENST00000442971 hCG_2014768A0A024R1R8 64 aa5.56□□□□□ -1.52
SSXP3-201ENST00000442971 ELOVL7A1L3X0 281 aa5.56□□□□□ -1.52
SSXP3-201ENST00000442971 LRRC30A6NM36 301 aa5.56□□□□□ -1.52
SSXP3-201ENST00000442971 ANKRD28O15084 1053 aa5.56□□□□□ -1.52
SSXP3-201ENST00000442971 ZNF264O43296 627 aa5.56□□□□□ -1.52
SSXP3-201ENST00000442971 EIF4E2O60573 245 aaKnown RBP5.56□□□□□ -1.52
SSXP3-201ENST00000442971 NKX2-2O95096 273 aa5.56□□□□□ -1.52
SSXP3-201ENST00000442971 B4GALT1P15291 398 aa5.56□□□□□ -1.52
SSXP3-201ENST00000442971 CCNA2P20248 432 aa5.56□□□□□ -1.52
SSXP3-201ENST00000442971 CTNNA1P35221 906 aaKnown RBP5.56□□□□□ -1.52
SSXP3-201ENST00000442971 ACAA2P42765 397 aaKnown RBP5.56□□□□□ -1.52
SSXP3-201ENST00000442971 MARCKSL1P49006 195 aa5.56□□□□□ -1.52
SSXP3-201ENST00000442971 MVDP53602 400 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms