RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 PPP1R14AQ96A00 147 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 MRI1Q9BV20 369 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 JAM3Q9BX67 310 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 TMPRSS13Q9BYE2 586 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 WDR76Q9H967 626 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 FBXL21Q9UKT6 434 aa8.25□□□□□ -1.09
COPB1-202ENST00000439561 KIAA0100Q14667 2235 aaKnown RBP8.24□□□□□ -1.09
COPB1-202ENST00000439561 FBXO24O75426 580 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 CTAG2O75638 210 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 APOC1P02654 83 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 ZNF14P17017 642 aaPredicted RBP8.24□□□□□ -1.09
COPB1-202ENST00000439561 CSF2RBP32927 897 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 CDKN2AP42771 156 aaKnown RBP8.24□□□□□ -1.09
COPB1-202ENST00000439561 RAB13P51153 203 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 DHRS2Q13268 280 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 SLC9A3R2Q15599 337 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 CST6Q15828 149 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 ZIC1Q15915 447 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 PAN3Q58A45 887 aaKnown RBP8.24□□□□□ -1.09
COPB1-202ENST00000439561 NKAPLQ5M9Q1 402 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 DPY19L2P2Q6ZN68 376 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 GALNT16Q8N428 558 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 FGF13Q92913 245 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 FOXRED1Q96CU9 486 aaPredicted RBP8.24□□□□□ -1.09
COPB1-202ENST00000439561 SLC25A44Q96H78 314 aaPredicted RBP8.24□□□□□ -1.09
COPB1-202ENST00000439561 INTS14Q96SY0 518 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 PHB2Q99623 299 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 GFI1Q99684 422 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 FAM83CQ9BQN1 747 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 GAREM1Q9H706 876 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 TMEM74BQ9NUR3 256 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 FRRS1LQ9P0K9 344 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 LRIT1Q9P2V4 623 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 SERGEFQ9UGK8 458 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 KLHDC2Q9Y2U9 406 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 H0YGG7 62 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 ALOX12BO75342 701 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 SFTPBP07988 381 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 PGAM2P15259 253 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 RAB5BP61020 215 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 ARF3P61204 181 aaPredicted RBP8.24□□□□□ -1.09
COPB1-202ENST00000439561 GPR18Q14330 331 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 ZNF542PQ5EBM4 170 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 AVPI1Q5T686 147 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 PRR22Q8IZ63 422 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 CSNK1A1LQ8N752 337 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 OR9A4Q8NGU2 314 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 OR2G2Q8NGZ5 317 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 LILRB1Q8NHL6 650 aaPredicted RBP8.24□□□□□ -1.09
COPB1-202ENST00000439561 PHYHIPQ92561 330 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 SLC22A18Q96BI1 424 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 PLEKHA1Q9HB21 404 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 NIT2Q9NQR4 276 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 DUSP22Q9NRW4 184 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 TBC1D29Q9UFV1 150 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 MSRAQ9UJ68 235 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 KCNG2Q9UJ96 466 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 PURGQ9UJV8 347 aaKnown RBP8.24□□□□□ -1.09
COPB1-202ENST00000439561 POLR1DQ9Y2S0 133 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 ENTPD2Q9Y5L3 495 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 PTP4A3O75365 173 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 SNAPINO95295 136 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 RPA2P15927 270 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 SLC2A5P22732 501 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 C11orf87Q6NUJ2 197 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 OR13C3Q8NGS6 347 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 RGP1Q92546 391 aaPredicted RBP8.24□□□□□ -1.09
COPB1-202ENST00000439561 CCDC74AQ96AQ1 378 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 FBXO17Q96EF6 278 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 LRRC3BQ96PB8 259 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 OR2M4Q96R27 311 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 ZBP1Q9H171 429 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 ELL3Q9HB65 397 aaPredicted RBP8.24□□□□□ -1.09
COPB1-202ENST00000439561 FGF22Q9HCT0 170 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 RPS10P5Q9NQ39 176 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 HAO2Q9NYQ3 351 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 NDRG3Q9UGV2 375 aa8.24□□□□□ -1.09
COPB1-202ENST00000439561 MRM2Q9UI43 246 aaKnown RBP8.24□□□□□ -1.09
COPB1-202ENST00000439561 TRPM7Q96QT4 1865 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 METTL21EPA6NDL7 271 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 BCL2L11O43521 198 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 BRINP1O60477 761 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 CTSVO60911 334 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 AK1P00568 194 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 SPP1P10451 314 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 TPT1P13693 172 aaKnown RBP8.23□□□□□ -1.09
COPB1-202ENST00000439561 PI3P19957 117 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 NME2P22392 152 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 NFYBP25208 207 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 PRPS1P60891 318 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 RIPPLY1Q0D2K3 151 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 SERTAD2Q14140 314 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 FAM53BQ14153 422 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 PEA15Q15121 130 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 TMEM52BQ4KMG9 183 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 OR52W1Q6IF63 320 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 NPEPL1Q8NDH3 523 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 ELP5Q8TE02 316 aa8.23□□□□□ -1.09
COPB1-202ENST00000439561 ZNF764Q96H86 408 aaPredicted RBP8.23□□□□□ -1.09
COPB1-202ENST00000439561 C10orf90Q96M02 699 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms