RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SLC38A6Q8IZM9 456 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 C14orf178Q8N769 122 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 STXBP6Q8NFX7 210 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 OR2L5Q8NG80 312 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 AENQ8WTP8 325 aaKnown RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 C2orf15Q8WU43 125 aaKnown RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 CTNNBL1Q8WYA6 563 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 NEIL2Q969S2 332 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 NUS1Q96E22 293 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 CELF6Q96J87 481 aaKnown RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 CEP170P1Q96L14 293 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 C12orf66Q96MD2 445 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 IL4I1Q96RQ9 567 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZNF184Q99676 751 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 GPA33Q99795 319 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 CCDC94Q9BW85 323 aaPredicted RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 CXCL16Q9H2A7 254 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 LRRN3Q9H3W5 708 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 RIBC2Q9H4K1 309 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 ELOVL3Q9HB03 270 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 NANSQ9NR45 359 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 SLC39A1Q9NY26 324 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 TMEM9Q9P0T7 183 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 GCNT4Q9P109 453 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 BTRCQ9Y297 605 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZNF106Q9H2Y7 1883 aaKnown RBP2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 TGP01266 2768 aa2.3□□□□□ -2.04
HMGB3P12-201ENST00000438745 NSD1Q96L73 2696 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 HIVEP2P31629 2446 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ABCA4P78363 2273 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 SHANK1Q9Y566 2161 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 LRRIQ4A6NIV6 560 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ARGFXA6NJG6 315 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZNF705EA8MWA4 302 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 PPIAL4DF5H284 164 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 G3V4G9 280 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 PRAMEF26H0Y7S4 382 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 SULT2B1O00204 365 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 XPO1O14980 1071 aaKnown RBP2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZNF264O43296 627 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 CACNG3O60359 315 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 LRATO95237 230 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 UGT2B4P06133 528 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 PTMAP06454 111 aaKnown RBP2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 IGLL1P15814 213 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 RPA2P15927 270 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 HNRNPA2B1P22626 353 aaKnown RBP2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 NTSP30990 170 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 NUDT1P36639 197 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ACAA2P42765 397 aaKnown RBP2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 RPS14P62263 151 aaKnown RBP2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 SLC7A9P82251 487 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 SPAG1Q07617 926 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 SMARCB1Q12824 385 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 RAB40BQ12829 278 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 SELPLGQ14242 412 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZNF235Q14590 738 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 C16orf72Q14CZ0 275 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 HERPUD1Q15011 391 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 DEFB113Q30KQ7 82 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 CHRFAM7AQ494W8 412 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 SLC36A3Q495N2 470 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 GGTA1PQ4G0N0 100 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 SLC25A24Q6NUK1 477 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 FAHD2BQ6P2I3 314 aaPredicted RBP2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 CES3Q6UWW8 571 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 NIPA1Q7RTP0 329 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 C16orf62Q7Z3J2 963 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 TMEM135Q86UB9 458 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZDHHC21Q8IVQ6 265 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZBTB8OSQ8IWT0 167 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 BBS7Q8IWZ6 715 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 NRMQ8IXM6 262 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ZNF100Q8IYN0 542 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ATP6V0D2Q8N8Y2 350 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 PAQR8Q8TEZ7 354 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ANKRD49Q8WVL7 239 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 FGGYQ96C11 551 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 FAHD2AQ96GK7 314 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 RIT2Q99578 217 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 DDA1Q9BW61 102 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 SPATA16Q9BXB7 569 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 TEKT3Q9BXF9 490 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ING2Q9H160 280 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 NEUROG2Q9H2A3 272 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 GLIPR2Q9H4G4 154 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 EHD1Q9H4M9 534 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 ISG20L2Q9H9L3 353 aaKnown RBP2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 SCML1Q9UN30 329 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 SNX6Q9UNH7 406 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 PLLPQ9Y342 182 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 OR10H1Q9Y4A9 318 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 KNL1Q8NG31 2342 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 PKDREJQ9NTG1 2253 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 CUBNO60494 3623 aa2.29□□□□□ -2.04
HMGB3P12-201ENST00000438745 A0A1B0GWJ7 208 aa2.28□□□□□ -2.04
HMGB3P12-201ENST00000438745 VSTM2BA6NLU5 285 aa2.28□□□□□ -2.04
HMGB3P12-201ENST00000438745 K7N7A8 449 aa2.28□□□□□ -2.04
HMGB3P12-201ENST00000438745 CYTH3O43739 400 aa2.28□□□□□ -2.04
HMGB3P12-201ENST00000438745 BCAS1O75363 584 aaPredicted RBP2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms