RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 TLCD2A6NGC4 264 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 GGT3PA6NGU5 568 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 I3L521 148 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 BGLAPP02818 100 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 NR0B1P51843 470 aaKnown RBP10.67□□□□□ -0.7
CD44-209ENST00000433892 EFNA3P52797 238 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 IKZF1Q13422 519 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 CLLU1Q5K131 121 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 ZNF626Q68DY1 528 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 DNM1P46Q6ZS02 220 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 BIVMQ86UB2 503 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 COMMD7Q86VX2 200 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 OR4C16Q8NGL9 310 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 ZNF721Q8TF20 911 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 ELMOD3Q96FG2 381 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 MNTQ99583 582 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 NUDT9Q9BW91 350 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 NARFLQ9H6Q4 476 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 GPN1Q9HCN4 374 aaPredicted RBP10.67□□□□□ -0.7
CD44-209ENST00000433892 CUTCQ9NTM9 273 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 MRTO4Q9UKD2 239 aaKnown RBP10.67□□□□□ -0.7
CD44-209ENST00000433892 SLC22A13Q9Y226 551 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 MAB21L2Q9Y586 359 aa10.67□□□□□ -0.7
CD44-209ENST00000433892 TRAV36DV7A0A075B6V5 113 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 FITM1A5D6W6 292 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 C2CD4DB7Z1M9 353 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 H7C417 338 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 CTAG2O75638 210 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 SLC25A12O75746 678 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 KDM4BO94953 1096 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 PNPP00491 289 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 VSIG10L2P0DP72 767 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 ZNF250P15622 560 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 CXCL2P19875 107 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 SLC6A8P48029 635 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 POU3F4P49335 361 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 BIKQ13323 160 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 OPCMLQ14982 345 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 ETFDHQ16134 617 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 CSRP2Q16527 193 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 ACKR1Q16570 336 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 DEFB133Q30KQ1 61 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 OR5M10Q6IEU7 315 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 ANKRD16Q6P6B7 361 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 OR1F2PQ96R84 312 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 GINS4Q9BRT9 223 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 MTFP1Q9UDX5 166 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 CDV3Q9UKY7 258 aaKnown RBP10.66□□□□□ -0.7
CD44-209ENST00000433892 B9D1Q9UPM9 204 aa10.66□□□□□ -0.7
CD44-209ENST00000433892 TRAV18A0A075B6X5 111 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 PLSCR5A0PG75 271 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 LILRA5A6NI73 299 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 SHOXO15266 292 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 SLC16A7O60669 478 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 SCO1O75880 301 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 RLN1P04808 185 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 IL5P05113 134 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 SPARCP09486 303 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 GIPP09681 153 aaPredicted RBP10.65□□□□□ -0.7
CD44-209ENST00000433892 EPHA4P54764 986 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 RAB14P61106 215 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 OC90Q02509 493 aaPredicted RBP10.65□□□□□ -0.7
CD44-209ENST00000433892 SLC17A1Q14916 467 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 EBPQ15125 230 aaKnown RBP10.65□□□□□ -0.7
CD44-209ENST00000433892 C2orf76Q3KRA6 126 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 VWA2Q5GFL6 755 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 C9orf40Q8IXQ3 194 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 PLPP7Q8NBV4 271 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 UXS1Q8NBZ7 420 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 OIT3Q8WWZ8 545 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 SFXN2Q96NB2 322 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 OR8B4Q96RC9 309 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 UTP23Q9BRU9 249 aaKnown RBP10.65□□□□□ -0.7
CD44-209ENST00000433892 PTDSS2Q9BVG9 487 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.65□□□□□ -0.7
CD44-209ENST00000433892 TBL1XR1Q9BZK7 514 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 C12orf10Q9HB07 376 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 PCNX3Q9H6A9 2034 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 IGKV3D-11A0A0A0MRZ8 115 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 PRSS37A4D1T9 235 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 SNRPGP15A8MWD9 76 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 PHYHO14832 338 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 SDC3O75056 442 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 OR6A2O95222 327 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 SIX6O95475 246 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 NME1P15531 152 aaKnown RBP10.65□□□□□ -0.7
CD44-209ENST00000433892 FAUP35544 74 aaKnown RBP10.65□□□□□ -0.7
CD44-209ENST00000433892 UBE2MP61081 183 aaKnown RBP10.65□□□□□ -0.7
CD44-209ENST00000433892 HYAL4Q2M3T9 481 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 ASPHD2Q6ICH7 369 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 MAMDC2Q7Z304 686 aaPredicted RBP10.65□□□□□ -0.7
CD44-209ENST00000433892 NUP54Q7Z3B4 507 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 MDGA2Q7Z553 956 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 BPHLQ86WA6 291 aaPredicted RBP10.65□□□□□ -0.7
CD44-209ENST00000433892 GKN2Q86XP6 184 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 SMRP1Q8NCR6 262 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 OR8S1Q8NH09 359 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 FAM3DQ96BQ1 224 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 CCDC120Q96HB5 630 aa10.65□□□□□ -0.7
CD44-209ENST00000433892 GSX2Q9BZM3 304 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms