RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 COPS3Q9UNS2 423 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 RBMX2Q9Y388 322 aaKnown RBP6.72□□□□□ -1.33
COL17A1-204ENST00000433822 ADAM18Q9Y3Q7 739 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 V9GY05 133 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 LOC400499M0QZD8 3231 aa6.72□□□□□ -1.33
COL17A1-204ENST00000433822 EML5Q05BV3 1969 aa6.71□□□□□ -1.33
COL17A1-204ENST00000433822 IGSF10Q6WRI0 2623 aa6.71□□□□□ -1.33
COL17A1-204ENST00000433822 RALGAPA1Q6GYQ0 2036 aa6.71□□□□□ -1.33
COL17A1-204ENST00000433822 SMIM30A4D0T7 59 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 TRABD2BA6NFA1 517 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 OR4C45A6NMZ5 311 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 DVL2O14641 736 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 NDUFB5O43674 189 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 CPNE3O75131 537 aaKnown RBP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 ZFPL1O95159 310 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 TCRBP04435 133 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 GYPBP06028 91 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 GP1BBP13224 206 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 ALOX5APP20292 161 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 DPP4P27487 766 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 TACR3P29371 465 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 HOXA6P31267 233 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 AQP2P41181 271 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 NAA10P41227 235 aaPredicted RBP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 POLR2HP52434 150 aaKnown RBP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 SLC26A5P58743 744 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 ERVK-25P63136 954 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 KLF9Q13886 244 aaPredicted RBP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 SF3B4Q15427 424 aaKnown RBP eCLIP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 TOMM34Q15785 309 aaPredicted RBP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 CARTPTQ16568 116 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 NTRK2Q16620 822 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 CLPPQ16740 277 aaPredicted RBP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 SLC25A35Q3KQZ1 300 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 FAM27D1Q5T7N8 215 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 LIPNQ5VXI9 398 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 HLA-DQA1Q5Y7H0 255 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 OLFML2AQ68BL7 652 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 RHBDD2Q6NTF9 364 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 FAM199XQ6PEV8 388 aaPredicted RBP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 APOOLQ6UXV4 268 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 RPTNQ6XPR3 784 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 LCNL1Q6ZST4 164 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 ZNF767PQ75MW2 155 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 LINGO2Q7L985 606 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 GRINAQ7Z429 371 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 RABEPKQ7Z6M1 372 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 C1QL4Q86Z23 238 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 C9orf40Q8IXQ3 194 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 TOMM5Q8N4H5 51 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 LRRC17Q8N6Y2 441 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 OR6K6Q8NGW6 343 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 LILRB4Q8NHJ6 448 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 OTOSQ8NHW6 89 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 NUBPLQ8TB37 319 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 ZNF519Q8TB69 540 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 DOK4Q8TEW6 326 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 TMEM234Q8WY98 164 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 ST8SIA1Q92185 356 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 CLDN23Q96B33 292 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 HAVCR1Q96D42 359 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 MED30Q96HR3 178 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 RADILQ96JH8 1075 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 MOGAT1Q96PD6 335 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 DPYSL5Q9BPU6 564 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 WWTR1Q9GZV5 400 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 SPRTNQ9H040 489 aaPredicted RBP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 COMMD4Q9H0A8 199 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 DUSP15Q9H1R2 295 aaPredicted RBP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 TXNIPQ9H3M7 391 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 RANBP3Q9H6Z4 567 aaPredicted RBP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 ZNF304Q9HCX3 659 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 RANGRFQ9HD47 186 aaPredicted RBP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 NOX4Q9NPH5 578 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 DIABLOQ9NR28 239 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 KLHL1Q9NR64 748 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 MCUBQ9NWR8 336 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 C2orf42Q9NWW7 574 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 STMN3Q9NZ72 180 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 GRHPRQ9UBQ7 328 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 MALT1Q9UDY8 824 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 R4GN57 208 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 ADAMTS20P59510 1910 aa6.71□□□□□ -1.34
COL17A1-204ENST00000433822 TP53BP1Q12888 1972 aaPredicted RBP6.71□□□□□ -1.34
COL17A1-204ENST00000433822 CEP192Q8TEP8 1941 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 SPTBP11277 2137 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 A0A0A6YYH2 397 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 CCDC163A0A0D9SF12 145 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 A6NIZ1 184 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 A6NJ64 397 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 A8MVM7 634 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 ACOT7O00154 380 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 GPR171O14626 319 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 PRRG2O14669 202 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 PIN1P1O15428 100 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 FADS1O60427 444 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 SELENOFO60613 162 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 ICOSLGO75144 302 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 SLC25A12O75746 678 aa6.7□□□□□ -1.34
COL17A1-204ENST00000433822 CDC123O75794 336 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms