RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 THEM4Q5T1C6 240 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 C9orf135Q5VTT2 229 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 AADACL4Q5VUY2 407 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 MEDAGQ5VYS4 303 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 FBXW9Q5XUX1 488 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 TFAP2EQ6VUC0 442 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 B3GLCTQ6Y288 498 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 ABHD12BQ7Z5M8 362 aaPredicted RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 BTLAQ7Z6A9 289 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 GLB1L2Q8IW92 636 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 OR6V1Q8N148 313 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 MCHR2Q969V1 340 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 NMD3Q96D46 503 aaKnown RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZMYND19Q96E35 227 aaPredicted RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 FOXN4Q96NZ1 517 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 DMRTA2Q96SC8 542 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 RBM24Q9BX46 236 aaKnown RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 LINC00470Q9BZP3 86 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 NMNAT2Q9BZQ4 307 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 RACGAP1Q9H0H5 632 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 OPN3Q9H1Y3 402 aaPredicted RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 SRA1Q9HD15 236 aaKnown RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 AMBNQ9NP70 447 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLC7A10Q9NS82 523 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 UBAP1Q9NZ09 502 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 MALT1Q9UDY8 824 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 Q9UFV3 132 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 FOXD3Q9UJU5 478 aaPredicted RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 POLR1DQ9Y2S0 133 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 PCDHGB5Q9Y5G0 923 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 FKBP7Q9Y680 259 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 FLNBO75369 2602 aaKnown RBP6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 PCNX3Q9H6A9 2034 aa6.99□□□□□ -1.29
HMGA1P4-201ENST00000428643 IGLV1-36A0A0B4J1U3 117 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 IGKV1D-43A0A0B4J1Z2 117 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 A0A1B0GUH1 482 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 SH3D21A4FU49 640 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 TVP23AA6NH52 213 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLC1A7O00341 560 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 DCTN6O00399 190 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 LRRTM2O43300 516 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 DHHO43323 396 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 XPNPEP2O43895 674 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 SEC14L2O76054 403 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 GLCEO94923 617 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 APOL3O95236 402 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 IL18BPO95998 194 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 MRPL3P09001 348 aaKnown RBP6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 DBTP11182 482 aaKnown RBP6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 B4GALT1P15291 398 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLC2A5P22732 501 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 GSTT1P30711 240 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 HTR1FP30939 366 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 NAA10P41227 235 aaPredicted RBP6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 GUCA1AP43080 201 aaPredicted RBP6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 MTNR1AP48039 350 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 EFNB1P98172 346 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 TEKQ02763 1124 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 ETFDHQ16134 617 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 HIST3H3Q16695 136 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 CEACAM16Q2WEN9 425 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLC35D3Q5M8T2 416 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLC25A30Q5SVS4 291 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 C6orf141Q5SZD1 244 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 C10orf128Q5T292 105 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 OTPQ5XKR4 325 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 LRFN4Q6PJG9 635 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 SLC25A47Q6Q0C1 308 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 LYPD4Q6UWN0 246 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 MEPCEQ7L2J0 689 aaKnown RBP6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 LINGO2Q7L985 606 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 ZBTB46Q86UZ6 589 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 BPIFB6Q8NFQ5 453 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 OR10H5Q8NGA6 315 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 OR51G2Q8NGK0 314 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 FBLIM1Q8WUP2 373 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 HTRA1Q92743 480 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 PTP4A1Q93096 173 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 KISS1RQ969F8 398 aaPredicted RBP6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 STARD4Q96DR4 205 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 RNFT2Q96EX2 444 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 CNN2Q99439 309 aaKnown RBP6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 DDOQ99489 341 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 PIGMQ9H3S5 423 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 SEC61A2Q9H9S3 476 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 GPR35Q9HC97 309 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 WARS2Q9UGM6 360 aaKnown RBP6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 BLOC1S6Q9UL45 172 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 B9D1Q9UPM9 204 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 MOKQ9UQ07 419 aa6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 COA3Q9Y2R0 106 aaPredicted RBP6.98□□□□□ -1.29
HMGA1P4-201ENST00000428643 CCDC182A6NF36 153 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 EFCAB10A6NFE3 127 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 FAM90A27PA6NNH2 459 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 SELENOFO60613 162 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 GPANK1O95872 356 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 SPARCP09486 303 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 GAAP10253 952 aa6.97□□□□□ -1.29
HMGA1P4-201ENST00000428643 CD8BP10966 210 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms