RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 ELOVL7A1L3X0 281 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 MEIOCA2RUB1 952 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 DUXAA6NLW8 204 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 A8MVM7 634 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 TMEM178BH3BS89 294 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 PHYHO14832 338 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 FCMRO60667 390 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 DNAJA2O60884 412 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 URI1O94763 535 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-203ENST00000424270 AK1P00568 194 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 THY1P04216 161 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 CD55P08174 381 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 GSTA1P08263 222 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 GSTA2P09210 222 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 QDPRP09417 244 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 PNMTP11086 282 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF26P17031 533 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-203ENST00000424270 NCF2P19878 526 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-203ENST00000424270 SLC6A2P23975 617 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 PGM1P36871 562 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 CLCQ05315 142 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 SLC36A2Q495M3 483 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 MTX3Q5HYI7 312 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 TCTEX1D4Q5JR98 221 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 PHYHD1Q5SRE7 291 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 C1orf140Q5VVS0 124 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 WDR25Q64LD2 544 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF774Q6NX45 483 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 CCDC121Q6ZUS5 278 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 KRT77Q7Z794 578 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 ZER1Q7Z7L7 766 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF584Q8IVC4 421 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 UEVLDQ8IX04 471 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 SKA3Q8IX90 412 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 ATG16L2Q8NAA4 619 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 RBM15BQ8NDT2 890 aaKnown RBP5.2□□□□□ -1.58
SDCBP-203ENST00000424270 OR5AK3PQ8NH89 298 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 VANGL1Q8TAA9 524 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-203ENST00000424270 ABHD4Q8TB40 342 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 SLC25A40Q8TBP6 338 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF483Q8TF39 744 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-203ENST00000424270 ITLN1Q8WWA0 313 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 EGLN2Q96KS0 407 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 SAMD8Q96LT4 415 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 OXGR1Q96P68 337 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 TSSK3Q96PN8 268 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 PRR25Q96S07 402 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 SH3GL3Q99963 347 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 TMEM246Q9BRR3 403 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 MCRIP2Q9BUT9 160 aaKnown RBP5.2□□□□□ -1.58
SDCBP-203ENST00000424270 EMC6Q9BV81 110 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 TRIM31Q9BZY9 425 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 DPY30Q9C005 99 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 OR2J1Q9GZK6 312 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 KCNN2Q9H2S1 579 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 REEP4Q9H6H4 257 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 RANBP3Q9H6Z4 567 aaPredicted RBP5.2□□□□□ -1.58
SDCBP-203ENST00000424270 ERVK-18Q9QC07 812 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 ONECUT1Q9UBC0 465 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 WDR45Q9Y484 360 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 DOCK11Q5JSL3 2073 aa5.2□□□□□ -1.58
SDCBP-203ENST00000424270 STAB2Q8WWQ8 2551 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 TRBV23-1A0A0A0MS06 115 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 IGHV3-64DA0A0J9YX35 117 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 TCRBV9S1A1TA0A576 114 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 TCRBV4S1A1TA0A5B7 111 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 CFAP73A6NFT4 308 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 C22orf46C9J442 243 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 PGRMC1O00264 195 aaKnown RBP5.19□□□□□ -1.58
SDCBP-203ENST00000424270 BCAS1O75363 584 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-203ENST00000424270 SNAP29O95721 258 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 RPS17P08708 135 aaKnown RBP5.19□□□□□ -1.58
SDCBP-203ENST00000424270 TFPTP0C1Z6 253 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 MATN1P21941 496 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 CBLP22681 906 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 HPCAL1P37235 193 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 RPS5P46782 204 aaKnown RBP5.19□□□□□ -1.58
SDCBP-203ENST00000424270 CSNK1A1P48729 337 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 SERPINB8P50452 374 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 ARHGDIAP52565 204 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 KCNJ10P78508 379 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 COX10Q12887 443 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 GNA13Q14344 377 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 HABP2Q14520 560 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-203ENST00000424270 TAF11Q15544 211 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 MAPK14Q16539 360 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 GPAT3Q53EU6 434 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF385BQ569K4 471 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 XKR7Q5GH72 579 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 C3orf62Q6ZUJ4 267 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 SLC16A14Q7RTX9 510 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 VMO1Q7Z5L0 202 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 C20orf196Q8IYI0 205 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 C1orf87Q8N0U7 546 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 SLC22A24Q8N4F4 322 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 OR51G2Q8NGK0 314 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 ZNF420Q8TAQ5 688 aaPredicted RBP5.19□□□□□ -1.58
SDCBP-203ENST00000424270 FAM76AQ8TAV0 307 aa5.19□□□□□ -1.58
SDCBP-203ENST00000424270 PNPT1Q8TCS8 783 aaKnown RBP5.19□□□□□ -1.58
SDCBP-203ENST00000424270 KLF14Q8TD94 323 aaPredicted RBP5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms