RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 XAGE5Q8WWM1 108 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 PARD6GQ9BYG4 376 aaPredicted RBP8.98□□□□□ -0.97
USP54-205ENST00000424265 COMMD4Q9H0A8 199 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 EXO5Q9H790 373 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 PLAC1Q9HBJ0 212 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 DCAF13Q9NV06 445 aaKnown RBP8.98□□□□□ -0.97
USP54-205ENST00000424265 SLCO1C1Q9NYB5 712 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 MRPL15Q9P015 296 aaKnown RBP8.98□□□□□ -0.97
USP54-205ENST00000424265 OR14J1Q9UGF5 321 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 SLC23A2Q9UGH3 650 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 HMSDA8MTL9 139 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 NCR1O76036 304 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 PNLIPP16233 465 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 HIST1H1TP22492 207 aaPredicted RBP8.98□□□□□ -0.97
USP54-205ENST00000424265 RPL29P47914 159 aaKnown RBP8.98□□□□□ -0.97
USP54-205ENST00000424265 SPANXN4Q5MJ08 99 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 MTFR2Q6P444 385 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 NUP54Q7Z3B4 507 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 ZNF610Q8N9Z0 462 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 SFXN5Q8TD22 340 aa8.98□□□□□ -0.97
USP54-205ENST00000424265 PACRGQ96M98 296 aaPredicted RBP8.98□□□□□ -0.97
USP54-205ENST00000424265 PLXNA4Q9HCM2 1894 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 MEX3AA1L020 520 aaKnown RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 VSTM5A8MXK1 200 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 CDRT15L2A8MXV6 281 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 RNASET2O00584 256 aaKnown RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 BHLHE40O14503 412 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 MAGEB4O15481 346 aaPredicted RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 CSO75390 466 aaKnown RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 RAB36O95755 333 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 DLSTP36957 453 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 ZNF84P51523 738 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 ACSM1Q08AH1 577 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 RCAN2Q14206 197 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 DECR1Q16698 335 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 GLT8D1Q68CQ7 371 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 Q6ZPB1 254 aaPredicted RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 LANCL3Q6ZV70 420 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 OR2W3Q7Z3T1 314 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 OR6V1Q8N148 313 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 ZNF615Q8N8J6 731 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 PROKR2Q8NFJ6 384 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 CCDC74AQ96AQ1 378 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 ZNF385AQ96PM9 386 aaKnown RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 SLAMF8Q9P0V8 285 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 SNX11Q9Y5W9 270 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 MTCL1Q9Y4B5 1905 aaKnown RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 A0A0G2JN53 185 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 SFTA3P0C7M3 94 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 GALP22466 123 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 HTR6P50406 440 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 F2RL1P55085 397 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 RAB38P57729 211 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 MESP2Q0VG99 397 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 ATP6V1FQ16864 119 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 DCAF12Q5T6F0 453 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 GGNBP1Q5YKI7 109 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 P4HA3Q7Z4N8 544 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 BAHD1Q8TBE0 780 aaPredicted RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 RNF141Q8WVD5 230 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 INPP5KQ9BT40 448 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 CDCA4Q9BXL8 241 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 ATG5Q9H1Y0 275 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 LYRM4Q9HD34 91 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 SERINC1Q9NRX5 453 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 NDUFB11Q9NX14 153 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 SLC35A3Q9Y2D2 325 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 H0YGG7 62 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 ZNF593O00488 134 aaPredicted RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 GSTP1P09211 210 aaKnown RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 CD46P15529 392 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 ART1P52961 327 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 ARF3P61204 181 aaPredicted RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 FAM24BQ8N5W8 94 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 BBS10Q8TAM1 723 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 G6PC3Q9BUM1 346 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 GPR173Q9NS66 373 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 UQCC1Q9NVA1 299 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 RASL12Q9NYN1 266 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 DNAJC27Q9NZQ0 273 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 SERTM1A2A2V5 107 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 HCRTR2O43614 444 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 NXPH2O95156 264 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 CNOT4O95628 575 aaKnown RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 TPT1P13693 172 aaKnown RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 RAB6AP20340 208 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 LILRA3Q8N6C8 439 aaPredicted RBP8.97□□□□□ -0.97
USP54-205ENST00000424265 ACOT4Q8N9L9 421 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 PITX2Q99697 317 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 TMEM27Q9HBJ8 222 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 NOX3Q9HBY0 568 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 PRDM6Q9NQX0 595 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 CUTCQ9NTM9 273 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 NTMQ9P121 344 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 MAP4K5Q9Y4K4 846 aa8.97□□□□□ -0.97
USP54-205ENST00000424265 OR5H15A6NDH6 313 aa8.96□□□□□ -0.97
USP54-205ENST00000424265 OR5H1A6NKK0 313 aa8.96□□□□□ -0.97
USP54-205ENST00000424265 GPR37L1O60883 481 aa8.96□□□□□ -0.97
USP54-205ENST00000424265 HTR2CP28335 458 aa8.96□□□□□ -0.97
USP54-205ENST00000424265 RAG2P55895 527 aa8.96□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms