RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SLC25A38Q96DW6 304 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 SLC41A2Q96JW4 573 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 NMNAT2Q9BZQ4 307 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 ADAM30Q9UKF2 790 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 FREM1Q5H8C1 2179 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 A0A1W2PPL8 197 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 HMX3A6NHT5 357 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 IFITM5A6NNB3 132 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 OGG1O15527 345 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 SSNA1O43805 119 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 AHSA1O95433 338 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 SIX6O95475 246 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 ANXA7P20073 488 aaKnown RBP10.73□□□□□ -0.69
PTPRN-204ENST00000423636 KIR3DL2P43630 455 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 VEGFCP49767 419 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 TLE3Q04726 772 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 TRILQ7L0X0 811 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 DCXRQ7Z4W1 244 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 DEFB123Q8N688 67 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 MR1Q95460 341 aa10.73□□□□□ -0.69
PTPRN-204ENST00000423636 MED13Q9UHV7 2174 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 BIDP55957 195 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 CBFBQ13951 182 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 TMEM69Q5SWH9 247 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 SLC25A25Q6KCM7 469 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 NOXA1Q86UR1 476 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 JAGN1Q8N5M9 183 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 FAM181AQ8N9Y4 354 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 OR7G1Q8NGA0 311 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 SETD6Q8TBK2 473 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 CMBLQ96DG6 245 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 LAT2Q9GZY6 243 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 RARRES3Q9UL19 164 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 SPATA2Q9UM82 520 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 BAIAP2Q9UQB8 552 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 V9GY05 133 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 P2RY10O00398 339 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 ARPC3O15145 178 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 SLC19A2O60779 497 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 ARL6IP5O75915 188 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 ALOX5APP20292 161 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 STARD6P59095 220 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 SF3A2Q15428 464 aaKnown RBP10.72□□□□□ -0.69
PTPRN-204ENST00000423636 ZNF627Q7L945 461 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 SLC16A9Q7RTY1 509 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 MAMDC2Q7Z304 686 aaPredicted RBP10.72□□□□□ -0.69
PTPRN-204ENST00000423636 POMGNT2Q8NAT1 580 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 FAM71CQ8NEG0 241 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 ADAM19Q9H013 955 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 NOX1Q9Y5S8 564 aa10.72□□□□□ -0.69
PTPRN-204ENST00000423636 TRAV36DV7A0A075B6V5 113 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 PRSS37A4D1T9 235 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 TMEM200CA6NKL6 621 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 ALG1L2C9J202 215 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 MEN1O00255 615 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 TCRBP04435 133 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 GNALP38405 381 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 P2RX1P51575 399 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 COL19A1Q14993 1142 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 FAM69AQ5T7M9 428 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 BIVMQ86UB2 503 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 FAM219AQ8IW50 185 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 OR11H7Q8NGC8 314 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 GIMAP1Q8WWP7 306 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 OR1F2PQ96R84 312 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 ABHD6Q9BV23 337 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 NDEL1Q9GZM8 345 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 HAO2Q9NYQ3 351 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 EPHA6Q9UF33 1036 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 TRAV18A0A075B6X5 111 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 FADS1O60427 444 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 TAS2R43P59537 309 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 POU4F2Q12837 409 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 TMEM176BQ3YBM2 270 aaPredicted RBP10.71□□□□□ -0.69
PTPRN-204ENST00000423636 TMEM71Q6P5X7 295 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 SLC26A10Q8NG04 563 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 IFI44Q8TCB0 444 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 SHDQ96IW2 340 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 MED28Q9H204 178 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 TAS2R4Q9NYW5 299 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 MRTO4Q9UKD2 239 aaKnown RBP10.71□□□□□ -0.69
PTPRN-204ENST00000423636 POLR1DQ9Y2S0 133 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 PTRH2Q9Y3E5 179 aaKnown RBP10.71□□□□□ -0.69
PTPRN-204ENST00000423636 PCDHGB7Q9Y5F8 929 aa10.71□□□□□ -0.69
PTPRN-204ENST00000423636 LY6G6EA0A0G2JKS1 128 aa10.71□□□□□ -0.7
PTPRN-204ENST00000423636 NPIPA5E9PKD4 350 aa10.71□□□□□ -0.7
PTPRN-204ENST00000423636 ARPC1BO15143 372 aaKnown RBP10.71□□□□□ -0.7
PTPRN-204ENST00000423636 ITGA5P08648 1049 aa10.71□□□□□ -0.7
PTPRN-204ENST00000423636 FAM157BP0CG42 384 aa10.71□□□□□ -0.7
PTPRN-204ENST00000423636 RPL27P61353 136 aaKnown RBP10.71□□□□□ -0.7
PTPRN-204ENST00000423636 TRIM61Q5EBN2 209 aa10.71□□□□□ -0.7
PTPRN-204ENST00000423636 BATF2Q8N1L9 274 aa10.71□□□□□ -0.7
PTPRN-204ENST00000423636 B3GNT4Q9C0J1 378 aa10.71□□□□□ -0.7
PTPRN-204ENST00000423636 PPP4R1LQ9P1A2 415 aa10.71□□□□□ -0.7
PTPRN-204ENST00000423636 WNT16Q9UBV4 365 aa10.71□□□□□ -0.7
PTPRN-204ENST00000423636 NPIPA1Q9UND3 350 aa10.71□□□□□ -0.7
PTPRN-204ENST00000423636 MMACHCQ9Y4U1 282 aa10.71□□□□□ -0.7
PTPRN-204ENST00000423636 U3KQA8 63 aa10.71□□□□□ -0.7
PTPRN-204ENST00000423636 C5orf63A6NC05 138 aa10.7□□□□□ -0.7
PTPRN-204ENST00000423636 MS4A18H0YCH9 400 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms