RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 ELOVL3Q9HB03 270 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 TAS2R8Q9NYW2 309 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 LOC100509620A0A075B734 347 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 TRBV5-5A0A0J9YX44 114 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 SLC22A23A1A5C7 686 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 ABHD16AO95870 558 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 SQSTM1Q13501 440 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 WDR38Q5JTN6 314 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 ANKRD16Q6P6B7 361 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 OR13H1Q8NG92 308 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 STK35Q8TDR2 534 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 FAM3DQ96BQ1 224 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 DMRTA2Q96SC8 542 aa13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 FARSAQ9Y285 508 aaKnown RBP13.75□□□□□ -0.21
SEMA3B-203ENST00000419007 TMEM212A6NML5 194 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 C17orf51A8MQB3 221 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 C5orf67F2Z3F1 127 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 SCDO00767 359 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 ALOX5APP20292 161 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 ARHGDIBP52566 201 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 SLC25A1P53007 311 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 ATXN7L3Q14CW9 347 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 RAB11BQ15907 218 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 MEP1BQ16820 701 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 FAM74A1Q5RGS3 127 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 MANEAQ5SRI9 462 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 STEAP1BQ6NZ63 245 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 POFUT1Q9H488 388 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF254O75437 659 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 B3GALNT1O75752 331 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 OR6A2O95222 327 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 RLN2P04090 185 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 SPARCP09486 303 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 PNMTP11086 282 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 TACR3P29371 465 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 GPR3P46089 330 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 HHEXQ03014 270 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 BIKQ13323 160 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 SCGB2B2Q4G0G5 96 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 OR6N1Q8NGY5 312 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 HOXB13Q92826 284 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF524Q96C55 264 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 APMAPQ9HDC9 416 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 GPR160Q9UJ42 338 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 TMEM272A0A1B0GTI8 110 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 B4DGG1 531 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 KRBOX1C9JBD0 128 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 TRIM77I1YAP6 450 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 XKRYO14609 159 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 CDC40O60508 579 aaKnown RBP eCLIP13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 EGR4Q05215 589 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 NKAIN2Q5VXU1 208 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 ATG4DQ86TL0 474 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 BOLLQ8N9W6 283 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 NKD1Q969G9 470 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 MRGPRX1Q96LB2 322 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 GAL3ST4Q96RP7 486 aa13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 GPX7Q96SL4 187 aaPredicted RBP13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 UTP23Q9BRU9 249 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 PNO1Q9NRX1 252 aaKnown RBP13.74□□□□□ -0.21
SEMA3B-203ENST00000419007 HMSDA8MTL9 139 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 SDC3O75056 442 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 CTSEP14091 401 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 TNFRSF4P43489 277 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 KIR3DL2P43630 455 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 ISXQ2M1V0 245 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 BEX5Q5H9J7 111 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 C1QL3Q5VWW1 255 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 BIVMQ86UB2 503 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 NARS2Q96I59 477 aaKnown RBP13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 ADOQ96SZ5 270 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 GAS2L1Q99501 681 aaPredicted RBP13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 SLC19A3Q9BZV2 496 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF230Q9UIE0 474 aaPredicted RBP13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 RP1P56715 2156 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 DCDC2BA2VCK2 349 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 CDC14CA4D256 554 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 FOXS1O43638 330 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 TNFP01375 233 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 ACHEP22303 614 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 MAOBP27338 520 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 KLHL26Q53HC5 615 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF660Q6AZW8 331 aaPredicted RBP13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF595Q8IYB9 648 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF321PQ8N8H1 164 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 EXD3Q8N9H8 876 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 TAAR8Q969N4 342 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 C4orf45Q96LM5 186 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 DCBLD2Q96PD2 775 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 OR8D2Q9GZM6 311 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 UBQLN4Q9NRR5 601 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 CGGBP1Q9UFW8 167 aaPredicted RBP13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 SLC6A5Q9Y345 797 aa13.73□□□□□ -0.21
SEMA3B-203ENST00000419007 ARID1AO14497 2285 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 RAB3DO95716 219 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 AMY2AP04746 511 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 RASGEF1BQ0VAM2 473 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 B3GNTL1Q67FW5 361 aaPredicted RBP13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 C17orf107Q6ZR85 190 aa13.72□□□□□ -0.21
SEMA3B-203ENST00000419007 ZNF546Q86UE3 836 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms