RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 RNF121Q9H920 327 aa14.22□□□□□ -0.13
LINC00404-201ENST00000418660 NMNAT1Q9HAN9 279 aaPredicted RBP14.22□□□□□ -0.13
LINC00404-201ENST00000418660 ZNF346Q9UL40 294 aaKnown RBP14.22□□□□□ -0.13
LINC00404-201ENST00000418660 SAMD4AQ9UPU9 718 aaKnown RBP14.22□□□□□ -0.13
LINC00404-201ENST00000418660 ARL2BPQ9Y2Y0 163 aa14.22□□□□□ -0.13
LINC00404-201ENST00000418660 CD5LO43866 347 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 GMNNO75496 209 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 IGHMP01871 453 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 SLC9A3P48764 834 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 EVX1P49640 407 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 CTXN1P60606 82 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 RPL27P61353 136 aaKnown RBP14.21□□□□□ -0.13
LINC00404-201ENST00000418660 GALK2Q01415 458 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 FHL1Q13642 323 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 TBPL2Q6SJ96 375 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 TMPRSS11FQ6ZWK6 438 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 RRM2BQ7LG56 351 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 SLC16A14Q7RTX9 510 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 OAFQ86UD1 273 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 MEX3DQ86XN8 651 aaKnown RBP14.21□□□□□ -0.13
LINC00404-201ENST00000418660 RNF148Q8N7C7 305 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 ANKS4BQ8N8V4 417 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 RBM15BQ8NDT2 890 aaKnown RBP14.21□□□□□ -0.13
LINC00404-201ENST00000418660 TNFRSF13CQ96RJ3 184 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 ALG12Q9BV10 488 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 C1orf198Q9H425 327 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 GORASP2Q9H8Y8 452 aa14.21□□□□□ -0.13
LINC00404-201ENST00000418660 MYOZ1Q9NP98 299 aaPredicted RBP14.21□□□□□ -0.13
LINC00404-201ENST00000418660 DCAF13Q9NV06 445 aaKnown RBP14.21□□□□□ -0.13
LINC00404-201ENST00000418660 FAM32AQ9Y421 112 aaKnown RBP14.21□□□□□ -0.13
LINC00404-201ENST00000418660 TRAV27A0A087WT01 109 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 NDUFS8O00217 210 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 TLX2O43763 284 aaPredicted RBP14.2□□□□□ -0.14
LINC00404-201ENST00000418660 GPRIN2O60269 458 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 SLC2A10O95528 541 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 PTHP01270 115 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 ERCC1P07992 297 aaPredicted RBP14.2□□□□□ -0.14
LINC00404-201ENST00000418660 RPS23P62266 143 aaKnown RBP14.2□□□□□ -0.14
LINC00404-201ENST00000418660 MRPS34P82930 218 aaKnown RBP14.2□□□□□ -0.14
LINC00404-201ENST00000418660 CD47Q08722 323 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 TOP3AQ13472 1001 aaPredicted RBP14.2□□□□□ -0.14
LINC00404-201ENST00000418660 FXNQ16595 210 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 MSMPQ1L6U9 139 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 THEM4Q5T1C6 240 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 GKAP1Q5VSY0 366 aaPredicted RBP14.2□□□□□ -0.14
LINC00404-201ENST00000418660 FAM205BPQ63HN1 556 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 SLC25A47Q6Q0C1 308 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 IGFN1Q86VF2 1251 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 SLC30A7Q8NEW0 376 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 OR13C2Q8NGS9 318 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 FNDC8Q8TC99 324 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 SLC7A13Q8TCU3 470 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 NEU4Q8WWR8 484 aaPredicted RBP14.2□□□□□ -0.14
LINC00404-201ENST00000418660 MRPL24Q96A35 216 aaKnown RBP14.2□□□□□ -0.14
LINC00404-201ENST00000418660 C7orf34Q96L11 122 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 LRRC37BQ96QE4 947 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 RBP7Q96R05 134 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 KCNN2Q9H2S1 579 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 SIAEQ9HAT2 523 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 NDUFAF4Q9P032 175 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 SLC7A8Q9UHI5 535 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 TAGLN3Q9UI15 199 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 TMEM5Q9Y2B1 443 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 UGT2A1Q9Y4X1 527 aa14.2□□□□□ -0.14
LINC00404-201ENST00000418660 FN1P02751 2386 aaKnown RBP14.2□□□□□ -0.14
LINC00404-201ENST00000418660 ARFGEF3Q5TH69 2177 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 CR1P17927 2039 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 LOC390937A0A1W2PQ73 354 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 A0A1W2PRQ8 180 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 SLC22A23A1A5C7 686 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 SH3PXD2BA1X283 911 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 A6NIZ1 184 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 VWC2LB2RUY7 222 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 DCTN3O75935 186 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 H1F0P07305 194 aaKnown RBP14.19□□□□□ -0.14
LINC00404-201ENST00000418660 HSD17B1P14061 328 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 RHCEP18577 417 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 GPR4P46093 362 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 RAP1BP61224 184 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 RAP1AP62834 184 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 PLP2Q04941 152 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 FMODQ06828 376 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 DGCR6Q14129 220 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 TMEM249Q2WGJ8 235 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 PODNL1Q6PEZ8 512 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 PGAM4Q8N0Y7 254 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 LRRC18Q8N456 261 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 FAM156AQ8NDB6 213 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 ZNF519Q8TB69 540 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 TSPAN32Q96QS1 320 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 MRPL37Q9BZE1 423 aaKnown RBP14.19□□□□□ -0.14
LINC00404-201ENST00000418660 DYNLRB1Q9NP97 96 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 ARL8BQ9NVJ2 186 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 CSPG4Q6UVK1 2322 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 HIVEP2P31629 2446 aa14.19□□□□□ -0.14
LINC00404-201ENST00000418660 IGKV1D-43A0A0B4J1Z2 117 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 IQCMA0A1B0GVH7 501 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 CDC42EP2O14613 210 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 SNAP29O95721 258 aa14.18□□□□□ -0.14
LINC00404-201ENST00000418660 IGFBP1P08833 259 aaPredicted RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms