RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 DCNP07585 359 aaKnown RBP7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 ERGP11308 486 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 CD80P33681 288 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 HMGN3Q15651 99 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 KRBOX4Q5JUW0 171 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC25A42Q86VD7 318 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 OR10H5Q8NGA6 315 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 OR5AK2Q8NH90 309 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 SLAMF9Q96A28 289 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 SEH1LQ96EE3 360 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 NRTNQ99748 197 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 CHMP1AQ9HD42 196 aaPredicted RBP7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 CES1P1Q9UKY3 287 aa7.29□□□□□ -1.24
HMGXB4-202ENST00000418170 SYNDIG1LA6NDD5 238 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 CDC40O60508 579 aaKnown RBP eCLIP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 CLEC3AO75596 197 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC6A9P48067 706 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 POU3F4P49335 361 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF383Q8NA42 475 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ISOC2Q96AB3 205 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 RRNAD1Q96FB5 475 aaKnown RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 KIRREL1Q96J84 757 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 LMLNQ96KR4 655 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 RHOVQ96L33 236 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 Q96M85 177 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 PHB2Q99623 299 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC17A9Q9BYT1 436 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC17A5Q9NRA2 495 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 PPP4R1LQ9P1A2 415 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 POMT1Q9Y6A1 747 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 C7orf77A4D0Y5 90 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 TVP23AA6NH52 213 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ALOX12BO75342 701 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 AIFM1O95831 613 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 LAMP2P13473 410 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 MAOAP21397 527 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 PSMB5P28074 263 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 LPAR6P43657 344 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 RBP2P50120 134 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 OR2B8PP59922 312 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 PPP1R1AQ13522 171 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 AWAT1Q58HT5 328 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC8B1Q6J4K2 584 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 MFSD12Q6NUT3 480 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC48A1Q6P1K1 146 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 TMEM150AQ86TG1 271 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 BPIFB2Q8N4F0 458 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF614Q8N883 585 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ARL14EPQ8N8R7 260 aaPredicted RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF417Q8TAU3 575 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 TRIM43Q96BQ3 446 aaPredicted RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 AKR1E2Q96JD6 320 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 OR5B2Q96R09 309 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ELF4Q99607 663 aaPredicted RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 GPR174Q9BXC1 333 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 PRDM13Q9H4Q3 707 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 SAGE1Q9NXZ1 904 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 VSIG4Q9Y279 399 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 DMDP11532 3685 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 VCANP13611 3396 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 TRBV5-7A0A0A0MS05 114 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 TERTO14746 1132 aaKnown RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 TGM5O43548 720 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 AGR2O95994 175 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 AK1P00568 194 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 HOXB5P09067 269 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 LIPCP11150 499 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 HOXA5P20719 270 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 AK4P27144 223 aaPredicted RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 OR1D2P34982 312 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 TM4SF4P48230 202 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 SLC11A1P49279 550 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 DVL1P1P54792 670 aaPredicted RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 SKP2Q13309 424 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ALKBH1Q13686 389 aaKnown RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ARHGAP11BQ3KRB8 267 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 MRPL2Q5T653 305 aaKnown RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 AWAT2Q6E213 333 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ADAM5Q6NVV9 412 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 C1QL4Q86Z23 238 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ZSCAN4Q8NAM6 433 aaPredicted RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 OR2A12Q8NGT7 310 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 MARS2Q96GW9 593 aaKnown RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 RBM18Q96H35 190 aaKnown RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ADAM19Q9H013 955 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 OR2AG1Q9H205 316 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 FRRS1LQ9P0K9 344 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 TMEM72A0PK05 275 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF736B4DX44 427 aaPredicted RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 EEF1E1-BLOC1S5C9J1V9 151 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 EIF1AYO14602 144 aaKnown RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 CYBAP13498 195 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 NME1P15531 152 aaKnown RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 TIMP2P16035 220 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 EIF1AXP47813 144 aaKnown RBP7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 SPCS3P61009 180 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ARHGAP19Q14CB8 494 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 TOMM20Q15388 145 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 CEBPEQ15744 281 aa7.28□□□□□ -1.24
HMGXB4-202ENST00000418170 ZNF239Q16600 458 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms