RNA–Protein interactions for RNA: ENST00000417440.2

CASP4-202, Transcript of caspase 4, humanhuman

TSL 3

Gene CASP4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-202ENST00000417440 ZNF584Q8IVC4 421 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 SLC22A24Q8N4F4 322 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 PAQR4Q8N4S7 273 aaPredicted RBP6.17□□□□□ -1.42
CASP4-202ENST00000417440 SLC30A7Q8NEW0 376 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 NANPQ8TBE9 248 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 SYNPRQ8TBG9 265 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 SNX33Q8WV41 574 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 DNAJA4Q8WW22 397 aaPredicted RBP6.17□□□□□ -1.42
CASP4-202ENST00000417440 C11orf40Q8WZ69 217 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 MISP3Q96FF7 219 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 SLC47A1Q96FL8 570 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 RCC1LQ96I51 464 aaKnown RBP6.17□□□□□ -1.42
CASP4-202ENST00000417440 LRR1Q96L50 414 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 EPYCQ99645 322 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 SUCNR1Q9BXA5 334 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 C1QTNF5Q9BXJ0 243 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 RSPO3Q9BXY4 272 aaPredicted RBP6.17□□□□□ -1.42
CASP4-202ENST00000417440 TMEM27Q9HBJ8 222 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 A4GALTQ9NPC4 353 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 ESM1Q9NQ30 184 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 G6PC2Q9NQR9 355 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 DDX28Q9NUL7 540 aaKnown RBP6.17□□□□□ -1.42
CASP4-202ENST00000417440 THUMPD1Q9NXG2 353 aaKnown RBP6.17□□□□□ -1.42
CASP4-202ENST00000417440 ZNF224Q9NZL3 707 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.17□□□□□ -1.42
CASP4-202ENST00000417440 GPR160Q9UJ42 338 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 HAO1Q9UJM8 370 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 SLC13A4Q9UKG4 626 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 PRDM4Q9UKN5 801 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 CACNG2Q9Y698 323 aa6.17□□□□□ -1.42
CASP4-202ENST00000417440 V9GYY5 206 aaPredicted RBP6.17□□□□□ -1.42
CASP4-202ENST00000417440 A0A0G2JMP0 313 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 A0A0X1KG70 313 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 LOC102725191A0A1B0GVB3 256 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 SHISA3A0PJX4 238 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 CLDN25C9JDP6 229 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 KPNA4O00629 521 aaPredicted RBP6.16□□□□□ -1.42
CASP4-202ENST00000417440 PLPP3O14495 311 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 OR8G3PP0DMU2 310 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 DRD4P21917 467 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 PRKAR1BP31321 381 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 LIMS1P48059 325 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 CDH12P55289 794 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 RGS8P57771 180 aaPredicted RBP6.16□□□□□ -1.42
CASP4-202ENST00000417440 MRPS11P82912 194 aaKnown RBP6.16□□□□□ -1.42
CASP4-202ENST00000417440 ZP4Q12836 540 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 HNRNPA0Q13151 305 aaKnown RBP6.16□□□□□ -1.42
CASP4-202ENST00000417440 HFEQ30201 348 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 SPATA46Q5T0L3 261 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 TMEM53Q6P2H8 277 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 WDR88Q6ZMY6 472 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 USP51Q70EK9 711 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 USP43Q70EL4 1123 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 PIWIL3Q7Z3Z3 882 aaKnown RBP6.16□□□□□ -1.42
CASP4-202ENST00000417440 C1QL2Q7Z5L3 287 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 TSPYL5Q86VY4 417 aaPredicted RBP6.16□□□□□ -1.42
CASP4-202ENST00000417440 KRT73Q86Y46 540 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 TEX29Q8N6K0 151 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 LSMEM1Q8N8F7 131 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 ZDHHC22Q8N966 263 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 ADPRHL1Q8NDY3 354 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 OR4M2Q8NGB6 313 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 OR4K5Q8NGD3 323 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 AENQ8WTP8 325 aaKnown RBP6.16□□□□□ -1.42
CASP4-202ENST00000417440 CCL17Q92583 94 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 GTF2H4Q92759 462 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 RAB39BQ96DA2 213 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 SLC41A3Q96GZ6 507 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 OR52B2Q96RD2 323 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 GAL3ST1Q99999 423 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 WFDC6Q9BQY6 131 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 SPATA5L1Q9BVQ7 753 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 PAIP1Q9H074 479 aaKnown RBP6.16□□□□□ -1.42
CASP4-202ENST00000417440 RAD21L1Q9H4I0 556 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 ZNF385DQ9H6B1 395 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 C12orf10Q9HB07 376 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 BCL2L10Q9HD36 194 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 THAP1Q9NVV9 213 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 GFOD1Q9NXC2 390 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 MRPL39Q9NYK5 338 aaKnown RBP6.16□□□□□ -1.42
CASP4-202ENST00000417440 UBAP1Q9NZ09 502 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 GLTPQ9NZD2 209 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 ZIM2Q9NZV7 527 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 FBXL3Q9UKT7 428 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 WIPI2Q9Y4P8 454 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 MEGF8Q7Z7M0 2845 aa6.16□□□□□ -1.42
CASP4-202ENST00000417440 TENM1Q9UKZ4 2725 aa6.15□□□□□ -1.42
CASP4-202ENST00000417440 IQCMA0A1B0GVH7 501 aa6.15□□□□□ -1.42
CASP4-202ENST00000417440 SLC22A23A1A5C7 686 aa6.15□□□□□ -1.42
CASP4-202ENST00000417440 CPSF4LA6NMK7 179 aaKnown RBP6.15□□□□□ -1.42
CASP4-202ENST00000417440 M0R3H8 397 aa6.15□□□□□ -1.42
CASP4-202ENST00000417440 UBDO15205 165 aa6.15□□□□□ -1.42
CASP4-202ENST00000417440 DHHO43323 396 aa6.15□□□□□ -1.42
CASP4-202ENST00000417440 RNF13O43567 381 aa6.15□□□□□ -1.42
CASP4-202ENST00000417440 PRSS23O95084 383 aa6.15□□□□□ -1.42
CASP4-202ENST00000417440 FARS2O95363 451 aaKnown RBP6.15□□□□□ -1.42
CASP4-202ENST00000417440 CH25HO95992 272 aa6.15□□□□□ -1.42
CASP4-202ENST00000417440 MT-ND5P03915 603 aa6.15□□□□□ -1.42
CASP4-202ENST00000417440 QDPRP09417 244 aa6.15□□□□□ -1.42
CASP4-202ENST00000417440 UMPSP11172 480 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms