RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 CDV3Q9UKY7 258 aaKnown RBP8.87□□□□□ -0.99
CD44-206ENST00000415148 CLDN16Q9Y5I7 305 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 FANCMQ8IYD8 2048 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 PCP4L1A6NKN8 68 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 FAM74A7A6NL05 159 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 HCRTR1O43613 425 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 CTAG2O75638 210 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 AQP8O94778 261 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 SPDEFO95238 335 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 NSA2O95478 260 aaKnown RBP8.87□□□□□ -0.99
CD44-206ENST00000415148 IL33O95760 270 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 HPGDP15428 266 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 ST6GAL1P15907 406 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 PGDP52209 483 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 MAZP56270 477 aaKnown RBP8.87□□□□□ -0.99
CD44-206ENST00000415148 SKP2Q13309 424 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 SERTAD2Q14140 314 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 ETFDHQ16134 617 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 FAM74A3Q4VXF1 159 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 TMEM184AQ6ZMB5 413 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 CDH26Q8IXH8 852 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 C19orf47Q8N9M1 422 aaKnown RBP8.87□□□□□ -0.99
CD44-206ENST00000415148 OR2AK2Q8NG84 335 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 OR4C16Q8NGL9 310 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 SLC37A2Q8TED4 501 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 TMEM106AQ96A25 262 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 MOGAT1Q96PD6 335 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 INTS14Q96SY0 518 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 LPAR4Q99677 370 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 PFDN2Q9UHV9 154 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 IKZF2Q9UKS7 526 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 F5H5P2 479 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 ZNF264O43296 627 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 KDM4BO94953 1096 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 GPANK1O95872 356 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 MAS1P04201 325 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 PRSS3P35030 304 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 MRPS21P82921 87 aaKnown RBP8.86□□□□□ -0.99
CD44-206ENST00000415148 EGR4Q05215 589 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 RPL18Q07020 188 aaKnown RBP8.86□□□□□ -0.99
CD44-206ENST00000415148 MESTQ5EB52 335 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 EIF4E3Q8N5X7 224 aaKnown RBP8.86□□□□□ -0.99
CD44-206ENST00000415148 BOLLQ8N9W6 283 aaKnown RBP8.86□□□□□ -0.99
CD44-206ENST00000415148 ZSCAN1Q8NBB4 408 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 ASB17Q8WXJ9 295 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 DPYSL5Q9BPU6 564 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 RPP25Q9BUL9 199 aaKnown RBP8.86□□□□□ -0.99
CD44-206ENST00000415148 ULBP3Q9BZM4 244 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 ADAM19Q9H013 955 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 WDR13Q9H1Z4 485 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 C1orf198Q9H425 327 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 UPB1Q9UBR1 384 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 ATG2AQ2TAZ0 1938 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 ARHGEF17Q96PE2 2063 aaPredicted RBP8.86□□□□□ -0.99
CD44-206ENST00000415148 C10orf142B7Z368 130 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 DNASE2O00115 360 aaPredicted RBP8.86□□□□□ -0.99
CD44-206ENST00000415148 DCTN6O00399 190 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 SCDO00767 359 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 CDC40O60508 579 aaKnown RBP eCLIP8.86□□□□□ -0.99
CD44-206ENST00000415148 PLATP00750 562 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 CLPSP04118 112 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 RLN1P04808 185 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 CTSBP07858 339 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 CD37P11049 281 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 ACHEP22303 614 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 PPICP45877 212 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 SLC6A8P48029 635 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 BTG2P78543 158 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 DMWDQ09019 674 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 MED25Q71SY5 747 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 PRSS35Q8N3Z0 413 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 ZNF454Q8N9F8 522 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 OR6N2Q8NGY6 317 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 OTOSQ8NHW6 89 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 C4orf45Q96LM5 186 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 TSPAN32Q96QS1 320 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 PBX4Q9BYU1 374 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 TTYH1Q9H313 450 aaPredicted RBP8.86□□□□□ -0.99
CD44-206ENST00000415148 MYOZ1Q9NP98 299 aaPredicted RBP8.86□□□□□ -0.99
CD44-206ENST00000415148 ZNF107Q9UII5 783 aaPredicted RBP8.86□□□□□ -0.99
CD44-206ENST00000415148 MRTO4Q9UKD2 239 aaKnown RBP8.86□□□□□ -0.99
CD44-206ENST00000415148 LHX6Q9UPM6 363 aa8.86□□□□□ -0.99
CD44-206ENST00000415148 LOC100289279A0A1B0GTE1 492 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 OR2W5A6NFC9 320 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 PRAMEF26H0Y7S4 382 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 H7C1C5 153 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 SLC17A2O00624 439 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 AKR7A3O95154 331 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 APOC3P02656 99 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 F13BP05160 661 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 FBXO45P0C2W1 286 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 RPA2P15927 270 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 PRKACAP17612 351 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 TPMTP51580 245 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 ACTBP60709 375 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 PPP1CAP62136 330 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 LCN6P62502 163 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 ACTG1P63261 375 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 SORDQ00796 357 aa8.85□□□□□ -0.99
CD44-206ENST00000415148 HHEXQ03014 270 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms