RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 NCF4Q15080 339 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 TEAD2Q15562 447 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 RNLSQ5VYX0 342 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 OR52W1Q6IF63 320 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 LRRC8BQ6P9F7 803 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 C12orf54Q6X4T0 127 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 SLC25A48Q6ZT89 311 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 LINC00336Q6ZUF6 198 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 MTERF4Q7Z6M4 381 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 GGNQ86UU5 652 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 DCUN1D3Q8IWE4 304 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 OR4D5Q8NGN0 318 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 RHEBL1Q8TAI7 183 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 DDI1Q8WTU0 396 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 RPL36ALQ969Q0 106 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 PNPLA2Q96AD5 504 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 MCUR1Q96AQ8 359 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 SGK3Q96BR1 496 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 OTUB2Q96DC9 234 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 DUX5Q96PT3 197 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 RNF2Q99496 336 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 ST6GALNAC5Q9BVH7 336 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 CLEC7AQ9BXN2 247 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 GAREM1Q9H706 876 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 STMN3Q9NZ72 180 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 ADA2Q9NZK5 511 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 RPH3ALQ9UNE2 315 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 GINS2Q9Y248 185 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 KCNIP3Q9Y2W7 256 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 RBMX2Q9Y388 322 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 COQ4Q9Y3A0 265 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 PCM1Q15154 2024 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 KCNE1BA0A087WTH5 132 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 PPIAL4CA0A0B4J2A2 164 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 ZNF840PA6NDX5 716 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 IGLON5A6NGN9 336 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 BTNL10A8MVZ5 291 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 AIREO43918 545 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 CTXN2P0C2S0 81 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 UBCP0CG48 685 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 STAG3L2P0CL84 134 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 PPIAL4GP0DN37 164 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 TCP1P17987 556 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 GSTM3P21266 225 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 DCKP27707 260 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 PDHA2P29803 388 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 OTX1P32242 354 aaPredicted RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 RPL13AP40429 203 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 PKNOX1P55347 436 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 POLR2GP62487 172 aaKnown RBP eCLIP2.15□□□□□ -2.07
MCF2-204ENST00000414978 TFAMQ00059 246 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 FAM83EQ2M2I3 478 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 SLC25A52Q3SY17 297 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 MLIPQ5VWP3 458 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 ZNF470Q6ECI4 717 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 CCDC137Q6PK04 289 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 HSD11B1LQ7Z5J1 315 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 LINC00523Q86TU6 105 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 FAM71AQ8IYT1 594 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 SYCE1Q8N0S2 351 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 TMEM156Q8N614 296 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 COMMD1Q8N668 190 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 RBMXL3Q8N7X1 1067 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 AQP11Q8NBQ7 271 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 OR1F12Q8NHA8 337 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 ACTL9Q8TC94 416 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 CD300LFQ8TDQ1 290 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 BIRC7Q96CA5 298 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 ANKRD36BP1Q96IX9 119 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 CAPZA3Q96KX2 299 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 ZNF670Q9BS34 389 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 CCM2Q9BSQ5 444 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 PAPOLGQ9BWT3 736 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 NMUR2Q9GZQ4 415 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 NT5DC2Q9H857 520 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 THUMPD1Q9NXG2 353 aaKnown RBP2.15□□□□□ -2.07
MCF2-204ENST00000414978 GGA2Q9UJY4 613 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 FBXL4Q9UKA2 621 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 HYOU1Q9Y4L1 999 aa2.15□□□□□ -2.07
MCF2-204ENST00000414978 FBLL1A6NHQ2 334 aaKnown RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 C11orf98E9PRG8 122 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 OAZ2O95190 189 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 EDN1P05305 212 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 WNT2P09544 360 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 MCF2P10911 925 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 LOXP28300 417 aaPredicted RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 GPR183P32249 361 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 TNFSF9P41273 254 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CEBPDP49716 269 aaPredicted RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 ELLP55199 621 aaPredicted RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 UBE2KP61086 200 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 YWHAEP62258 255 aaKnown RBP2.14□□□□□ -2.07
MCF2-204ENST00000414978 ZNF33AQ06730 810 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 CDH17Q12864 832 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 SELENBP1Q13228 472 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 DCAF4L1Q3SXM0 396 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 HES3Q5TGS1 186 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 PLCXD3Q63HM9 321 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 LRRC31Q6UY01 552 aa2.14□□□□□ -2.07
MCF2-204ENST00000414978 GDPD4Q6W3E5 623 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms