RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CNTRLQ7Z7A1 2325 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 DAPL1A0PJW8 107 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 ZNF726A6NNF4 738 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 KHDRBS3O75525 346 aaKnown RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 WISP2O76076 250 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 AQP8O94778 261 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 CRYABP02511 175 aaKnown RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 SCG5P05408 212 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 OR2T7P0C7T2 308 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 FAM87AP0C7U9 286 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 HSMCR30P0CW71 290 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 PTGS2P35354 604 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 LIPAP38571 399 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 CSNK1A1P48729 337 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 SELENOPP49908 381 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 ZNF133P52736 654 aaPredicted RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 BLVRAP53004 296 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 ACTA2P62736 377 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 ACTG2P63267 376 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 RASGEF1BQ0VAM2 473 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 MLLT11Q13015 90 aaPredicted RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 GALEQ14376 348 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 SPHARQ15513 63 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 ETFDHQ16134 617 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 LINC00303Q3SY05 128 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 PLEKHN1Q494U1 663 aaPredicted RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 THEM4Q5T1C6 240 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 GPR107Q5VW38 600 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 SLC25A47Q6Q0C1 308 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 ZNF322Q6U7Q0 402 aaPredicted RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 PLXDC2Q6UX71 529 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 SSX6Q7RTT6 188 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 CDC20BQ86Y33 519 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 CLVS1Q8IUQ0 354 aaPredicted RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 GLB1L2Q8IW92 636 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 Q8NA96 180 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 SLC26A10Q8NG04 563 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 OR6N2Q8NGY6 317 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 OR2T27Q8NH04 317 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 ZNF420Q8TAQ5 688 aaPredicted RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 FNDC9Q8TBE3 224 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 SPRYD4Q8WW59 207 aaPredicted RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 TMEM54Q969K7 222 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 PNPLA2Q96AD5 504 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 TMEM45BQ96B21 275 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 SARAFQ96BY9 339 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 ISOC1Q96CN7 298 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 YIPF6Q96EC8 236 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 FOXN4Q96NZ1 517 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 RBP7Q96R05 134 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 INTS14Q96SY0 518 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 MNTQ99583 582 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 MGLLQ99685 303 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 FUNDC2Q9BWH2 189 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 TTTY10Q9BZA0 68 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 WDR76Q9H967 626 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 MRPL22Q9NWU5 206 aaKnown RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 LUZP4Q9P127 313 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 KLHL9Q9P2J3 617 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 ENPP5Q9UJA9 477 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 TUBD1Q9UJT1 453 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 FOXD3Q9UJU5 478 aaPredicted RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 ZMIZ1Q9ULJ6 1067 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 CAMK2AQ9UQM7 478 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 COA3Q9Y2R0 106 aaPredicted RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 KLHDC2Q9Y2U9 406 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 CAB39Q9Y376 341 aaPredicted RBP5.9□□□□□ -1.46
VPS41-204ENST00000413141 ZNF175Q9Y473 711 aa5.9□□□□□ -1.46
VPS41-204ENST00000413141 PTPRQQ9UMZ3 2332 aa5.9□□□□□ -1.47
VPS41-204ENST00000413141 DMXL2Q8TDJ6 3036 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 A0A1B0GTH9 108 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 A0A1W2PPL8 197 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 OR14I1A6ND48 311 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 TMEM8BA6NDV4 472 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 CCDC160A6NGH7 325 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 SLC22A20A6NK97 555 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 ZNF724A8MTY0 619 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 PRR32B1ATL7 298 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 ZNF670-ZNF695F2Z2N8 137 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 H3BSA7 217 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 ZNF701M0R085 212 aaPredicted RBP5.89□□□□□ -1.47
VPS41-204ENST00000413141 CCRL2O00421 344 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 GPR171O14626 319 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 PHYHO14832 338 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 SLC43A1O75387 559 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 GABARAPO95166 117 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 LALBAP00709 142 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 HLA-DQA2P01906 255 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 HRGP04196 525 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 QDPRP09417 244 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 FCGR2AP12318 317 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 CD36P16671 472 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 NTF4P34130 210 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 CAPZA2P47755 286 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 RGS6P49758 472 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 ENTPD1P49961 510 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 HCCSP53701 268 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 ADAM8P78325 824 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 BDH1Q02338 343 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 HSF2Q03933 536 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms