RNA–Protein interactions for RNA: ENST00000411423.1

SF3A1-202, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 4

Gene SF3A1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-202ENST00000411423 OR8G3PP0DMU2 310 aa16.44■□□□□ 0.22
SF3A1-202ENST00000411423 SAGP10523 405 aaPredicted RBP16.44■□□□□ 0.22
SF3A1-202ENST00000411423 NPR2P20594 1047 aa16.44■□□□□ 0.22
SF3A1-202ENST00000411423 CTXN1P60606 82 aa16.44■□□□□ 0.22
SF3A1-202ENST00000411423 SNRPD2P62316 118 aaKnown RBP16.44■□□□□ 0.22
SF3A1-202ENST00000411423 DAG1Q14118 895 aa16.44■□□□□ 0.22
SF3A1-202ENST00000411423 PODNL1Q6PEZ8 512 aa16.44■□□□□ 0.22
SF3A1-202ENST00000411423 SLC25A47Q6Q0C1 308 aa16.44■□□□□ 0.22
SF3A1-202ENST00000411423 ZNF730Q6ZMV8 503 aa16.44■□□□□ 0.22
SF3A1-202ENST00000411423 PGAM4Q8N0Y7 254 aa16.44■□□□□ 0.22
SF3A1-202ENST00000411423 ZNF519Q8TB69 540 aa16.44■□□□□ 0.22
SF3A1-202ENST00000411423 C10orf105Q8TEF2 133 aa16.44■□□□□ 0.22
SF3A1-202ENST00000411423 EFCAB9A8MZ26 197 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 CENPBD1B2RD01 187 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 RAB36O95755 333 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 MMP7P09237 267 aaPredicted RBP16.43■□□□□ 0.22
SF3A1-202ENST00000411423 CCL2P13500 99 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 RPL27P61353 136 aaKnown RBP16.43■□□□□ 0.22
SF3A1-202ENST00000411423 SEC23BQ15437 767 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 CLEC2AQ6UVW9 174 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 LRP11Q86VZ4 500 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 RNF113BQ8IZP6 322 aaKnown RBP16.43■□□□□ 0.22
SF3A1-202ENST00000411423 LRRC18Q8N456 261 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 IL17RDQ8NFM7 739 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 NSMAFQ92636 917 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 VRK1Q99986 396 aaPredicted RBP16.43■□□□□ 0.22
SF3A1-202ENST00000411423 RHNO1Q9BSD3 238 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 FUZQ9BT04 418 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 MRPL37Q9BZE1 423 aaKnown RBP16.43■□□□□ 0.22
SF3A1-202ENST00000411423 GORASP2Q9H8Y8 452 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 RPS6KA6Q9UK32 745 aa16.43■□□□□ 0.22
SF3A1-202ENST00000411423 TLN2Q9Y4G6 2542 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 TRBV4-1A0A0J9YWV2 114 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 SERPINA5P05154 406 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 HSD17B1P14061 328 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 IFNA8P32881 189 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 LIMS1P48059 325 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 FXYD6P3P58550 94 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 KRTAP21-3Q3LHN1 58 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 TMPRSS11FQ6ZWK6 438 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 OAFQ86UD1 273 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 FITM2Q8N6M3 262 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 FAM46AQ96IP4 442 aaKnown RBP16.42■□□□□ 0.22
SF3A1-202ENST00000411423 DHRS1Q96LJ7 313 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 LRRC37BQ96QE4 947 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 CDRT15Q96T59 188 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 GPA33Q99795 319 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 DENND2DQ9H6A0 471 aaPredicted RBP16.42■□□□□ 0.22
SF3A1-202ENST00000411423 MYEF2Q9P2K5 600 aaKnown RBP16.42■□□□□ 0.22
SF3A1-202ENST00000411423 FZR1Q9UM11 496 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 ADAM18Q9Y3Q7 739 aa16.42■□□□□ 0.22
SF3A1-202ENST00000411423 A0A1W2PRQ8 180 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 SH3PXD2BA1X283 911 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 HTR3EA5X5Y0 456 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 VWC2LB2RUY7 222 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 H7C1C5 153 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 IMPA2O14732 288 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 ARPC2O15144 300 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 MGRN1O60291 552 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 SCG5P05408 212 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 H1F0P07305 194 aaKnown RBP16.41■□□□□ 0.22
SF3A1-202ENST00000411423 OMPP47874 163 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 PPOXP50336 477 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 LCN6P62502 163 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 ERVK-25P63136 954 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 CD47Q08722 323 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 DGCR6Q14129 220 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 SLC16A14Q7RTX9 510 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 FAM168AQ92567 244 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 MRPL24Q96A35 216 aaKnown RBP16.41■□□□□ 0.22
SF3A1-202ENST00000411423 CCT8L2Q96SF2 557 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 ANKRD19PQ9H560 264 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 SAMD4AQ9UPU9 718 aaKnown RBP16.41■□□□□ 0.22
SF3A1-202ENST00000411423 NAV3Q8IVL0 2385 aa16.41■□□□□ 0.22
SF3A1-202ENST00000411423 PTP4A3O75365 173 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 BMP4P12644 408 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 RHCEP18577 417 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 SLC9A3P48764 834 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 ZNF84P51523 738 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 DSCR9P59020 149 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 ERVS71-1P61550 626 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 MRPS34P82930 218 aaKnown RBP16.4■□□□□ 0.22
SF3A1-202ENST00000411423 TAF11Q15544 211 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 NRN1LQ496H8 165 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 THSD4Q6ZMP0 1018 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 FAM122BQ7Z309 247 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 HDDC2Q7Z4H3 204 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 CYP4Z1Q86W10 505 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 PRIMA1Q86XR5 153 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 DEFB107AQ8IZN7 70 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 CPEB3Q8NE35 698 aaKnown RBP16.4■□□□□ 0.22
SF3A1-202ENST00000411423 SLC30A7Q8NEW0 376 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 OR52J3Q8NH60 311 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 PYURFQ96I23 114 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 SYT3Q9BQG1 590 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 ALG12Q9BV10 488 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 RNF121Q9H920 327 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 SMURF2Q9HAU4 748 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 CMAHPQ9Y471 501 aa16.4■□□□□ 0.22
SF3A1-202ENST00000411423 YLPM1P49750 1951 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms