RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 HSD17B11Q8NBQ5 300 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 OR6X1Q8NH79 312 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 MCOLN3Q8TDD5 553 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 PEX13Q92968 403 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 SMIM10Q96HG1 83 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 OR2M2Q96R28 347 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 NRTNQ99748 197 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 IQCGQ9H095 443 aaKnown RBP2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 NXF3Q9H4D5 531 aaKnown RBP2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 ELOVL6Q9H5J4 265 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 NANOGQ9H9S0 305 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 CTPS2Q9NRF8 586 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 SAMSN1Q9NSI8 373 aaKnown RBP2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 MTCH1Q9NZJ7 389 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 CLN8Q9UBY8 286 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 NUFIP1Q9UHK0 495 aaKnown RBP2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 LGALS13Q9UHV8 139 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 ZNF225Q9UK10 706 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 TBC1D24Q9ULP9 559 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 GOLT1BQ9Y3E0 138 aa2.79□□□□□ -1.96
RNU2-28P-201ENST00000410457 KCNE1BA0A087WTH5 132 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 SPECC1L-ADORA2AF8WAN1 911 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 XKRYO14609 159 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 TRAF3IP2O43734 574 aaPredicted RBP2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 TNFSF13O75888 250 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 FGFR1OPO95684 399 aaKnown RBP2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 C6orf47O95873 294 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 INSP01308 110 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 RALBP11234 206 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 FOLR1P15328 257 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 CD1EP15812 388 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 HMOX2P30519 316 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 NUDT1P36639 197 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 ACTA2P62736 377 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 ACTG2P63267 376 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 ACTC1P68032 377 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 ACTA1P68133 377 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 CLINT1Q14677 625 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 SF3A2Q15428 464 aaKnown RBP2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 RFX4Q33E94 735 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 TMEM255AQ5JRV8 349 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 TWF2Q6IBS0 349 aaKnown RBP2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 TMEM179Q6ZVK1 233 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 CAMK2N1Q7Z7J9 78 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 MMAAQ8IVH4 418 aaKnown RBP2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 ZNF502Q8TBZ5 544 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 DUS3LQ96G46 650 aaKnown RBP2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 AURKBQ96GD4 344 aaPredicted RBP2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 XPO6Q96QU8 1125 aaKnown RBP2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 P2RX4Q99571 388 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 NTN4Q9HB63 628 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 PDFQ9HBH1 243 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 HRASLS2Q9NWW9 162 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 SLC17A4Q9Y2C5 497 aa2.78□□□□□ -1.96
RNU2-28P-201ENST00000410457 OBSCNQ5VST9 7968 aa2.78□□□□□ -1.97
RNU2-28P-201ENST00000410457 PDS5BQ9NTI5 1447 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 ZNF646O15015 1829 aaPredicted RBP2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 PLEKHG2Q9H7P9 1386 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 A0A1B0GTQ1 180 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 TRIM49D1C9J1S8 452 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 GOLGA8TH3BQL2 631 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 EIF4E2O60573 245 aaKnown RBP2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 SERPINA5P05154 406 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 GSTM3P21266 225 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 BCKDHBP21953 392 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 MAGEA1P43355 309 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 RPS5P46782 204 aaKnown RBP2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 RPS21P63220 83 aaKnown RBP2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 BEX5Q5H9J7 111 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 SOHLH1Q5JUK2 328 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 MARCH1Q8TCQ1 289 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 DTX3LQ8TDB6 740 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 BLOC1S5Q8TDH9 187 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 ACER1Q8TDN7 264 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 GLYATL2Q8WU03 294 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 GEMIN6Q8WXD5 167 aaKnown RBP2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 ELSPBP1Q96BH3 223 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 LRRC58Q96CX6 371 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 CLMPQ9H6B4 373 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 RPF2Q9H7B2 306 aaKnown RBP2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 MRPL22Q9NWU5 206 aaKnown RBP2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 ZNF226Q9NYT6 803 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 SLC25A37Q9NYZ2 338 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 CCDC59Q9P031 241 aaKnown RBP2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 PDP1Q9P0J1 537 aaPredicted RBP2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 TRAPPC4Q9Y296 219 aa2.77□□□□□ -1.97
RNU2-28P-201ENST00000410457 CEMIPQ8WUJ3 1361 aa2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 PHLPP2Q6ZVD8 1323 aa2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 ZNF816-ZNF321PA0A0X1KG74 233 aa2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 LYRM9A8MSI8 78 aa2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 SUPT3HB4E1H0 165 aa2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 F6UB75 175 aa2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 SCAMP2O15127 329 aaKnown RBP2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 ZDHHC11BP0C7U3 371 aa2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 CALM1P0DP23 149 aa2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 CALM2P0DP24 149 aa2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 CALM3P0DP25 149 aa2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 GZMAP12544 262 aa2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 ZNF17P17021 662 aa2.76□□□□□ -1.97
RNU2-28P-201ENST00000410457 CCNE1P24864 410 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms