RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 OR6X1Q8NH79 312 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 CLHC1Q8NHS4 586 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 NDNFQ8TB73 568 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 HMGCLL1Q8TB92 370 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SMPDL3AQ92484 453 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 TMBIM1Q969X1 311 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF501Q96CX3 271 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 R3HDM4Q96D70 268 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 YIPF6Q96EC8 236 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 NUDT11Q96G61 164 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SLC45A3Q96JT2 553 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 TTYH2Q9BSA4 534 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 PCGF1Q9BSM1 259 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 DPH7Q9BTV6 452 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ABHD14AQ9BUJ0 271 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 DDA1Q9BW61 102 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 LHPPQ9H008 270 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SPRTNQ9H040 489 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 MAGT1Q9H0U3 335 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 OR51V1Q9H2C8 321 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SAV1Q9H4B6 383 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 ALG9Q9H6U8 611 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 HEXA-AS1Q9H8Q6 139 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 HHATLQ9HCP6 504 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 TREM1Q9NP99 234 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 MYNNQ9NPC7 610 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 MCUBQ9NWR8 336 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 KLHL28Q9NXS3 571 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 PILRAQ9UKJ1 303 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 RALYQ9UKM9 306 aaKnown RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 SLC9A8Q9Y2E8 581 aa4.11□□□□□ -1.75
SF3B1-202ENST00000409915 MRPS18BQ9Y676 258 aaKnown RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 KMT2BQ9UMN6 2715 aaPredicted RBP4.11□□□□□ -1.75
SF3B1-202ENST00000409915 CACNA1BQ00975 2339 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 PTPRQQ9UMZ3 2332 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ATMQ13315 3056 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 A0A096LPK6 155 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 A0A0A0MQY5 61 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 A0A1W2PPQ1 181 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 A0A1W2PS29 197 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 FEZF1A0PJY2 475 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SLC22A23A1A5C7 686 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CCDC182A6NF36 153 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ANKUB1A6NFN9 424 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CLDN24A6NM45 220 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 E7EQ34 232 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 AP4M1O00189 453 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SULT1C2O00338 296 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 VCYO14598 125 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 GPR171O14626 319 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF195O14628 629 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 AIM2O14862 343 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SLC16A5O15375 505 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 P2RX6O15547 441 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF749O43361 778 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 TMPRSS11DO60235 418 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 PRKRAO75569 313 aaKnown RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SUPT7LO94864 414 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 NSA2O95478 260 aaKnown RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 IFNA2P01563 188 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 IFNA10P01566 189 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 IFNA7P01567 189 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 OPN1LWP04000 364 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 RAF1P04049 648 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 C2P06681 752 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CRHP06850 196 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CD63P08962 238 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 HIST1H2AGP0C0S8 130 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ACSM4P0C7M7 580 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ZNF888P0CJ79 500 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 RNF224P0DH78 156 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 RNH1P13489 461 aaKnown RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 ETFAP13804 333 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 LIFP15018 202 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CD1EP15812 388 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 LAP3P28838 519 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CMPK1P30085 196 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CALCRP30988 508 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 FCGR2BP31994 310 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 RYKP34925 604 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CHI3L1P36222 383 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CD79BP40259 229 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 RPL35P42766 123 aaKnown RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 MAGEA12P43365 314 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CEBPDP49716 269 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CSRP3P50461 194 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 MTCP1P56278 107 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CLDN8P56748 225 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 VSX2P58304 361 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 SUMO2P61956 95 aaKnown RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 RPS18P62269 152 aaKnown RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 CXADRP78310 365 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 DLK1P80370 383 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 MAT1AQ00266 395 aaKnown RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 HGFACQ04756 655 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 BST1Q10588 318 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 STX5Q13190 355 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 DYRK1AQ13627 763 aa4.1□□□□□ -1.75
SF3B1-202ENST00000409915 GK2Q14410 553 aaPredicted RBP4.1□□□□□ -1.75
SF3B1-202ENST00000409915 HLXQ14774 488 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms