RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 U3KQV3 271 aa9.52□□□□□ -0.89
CHMP3-205ENST00000409810 PDZD2O15018 2839 aa9.52□□□□□ -0.89
CHMP3-205ENST00000409810 AKAP9Q99996 3911 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 SHISA9B4DS77 424 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 ARHGEF9O43307 516 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 FKBP6O75344 327 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 E2F6O75461 281 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 IGLV1-44P01699 117 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 CRYAAP02489 173 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 CD79AP11912 226 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 APEHP13798 732 aaKnown RBP9.51□□□□□ -0.89
CHMP3-205ENST00000409810 CBR1P16152 277 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 GSTM3P21266 225 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 GSSP48637 474 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 IDH3GP51553 393 aaPredicted RBP9.51□□□□□ -0.89
CHMP3-205ENST00000409810 ARHGDIAP52565 204 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 CBX1P83916 185 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 NPRL3Q12980 569 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 KRR1Q13601 381 aaKnown RBP9.51□□□□□ -0.89
CHMP3-205ENST00000409810 MICAQ29983 383 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 RFX4Q33E94 735 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 SLC36A2Q495M3 483 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 ZNF620Q6ZNG0 422 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 FAM122BQ7Z309 247 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 SLC22A24Q8N4F4 322 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 AQP11Q8NBQ7 271 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 IL17RDQ8NFM7 739 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 OR9Q2Q8NGE9 314 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 NSMAFQ92636 917 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 Q96M85 177 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 LIME1Q9H400 295 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 CXorf56Q9H5V9 222 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 CISD1Q9NZ45 108 aaKnown RBP9.51□□□□□ -0.89
CHMP3-205ENST00000409810 ITGB1BP2Q9UKP3 347 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 ADAM18Q9Y3Q7 739 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 CDH10Q9Y6N8 788 aa9.51□□□□□ -0.89
CHMP3-205ENST00000409810 PRRC2AP48634 2157 aaKnown RBP9.5□□□□□ -0.89
CHMP3-205ENST00000409810 IGHV1-18A0A0C4DH31 117 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 TEX13CA0A0J9YWL9 993 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 PRSS37A4D1T9 235 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 ARRDC5A6NEK1 342 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 IMPA2O14732 288 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 DEAF1O75398 565 aaPredicted RBP9.5□□□□□ -0.89
CHMP3-205ENST00000409810 SLC2A10O95528 541 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 HLA-HP01893 362 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 CECR9P0C854 216 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 ZNF26P17031 533 aaPredicted RBP9.5□□□□□ -0.89
CHMP3-205ENST00000409810 CD53P19397 219 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 NOS3P29474 1203 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 PTDSS1P48651 473 aaKnown RBP9.5□□□□□ -0.89
CHMP3-205ENST00000409810 MRPS34P82930 218 aaKnown RBP9.5□□□□□ -0.89
CHMP3-205ENST00000409810 NAAAQ02083 359 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 DEFB113Q30KQ7 82 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 MESTQ5EB52 335 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 TMEM53Q6P2H8 277 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 DNM1P34Q6PK57 102 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 SLC25A47Q6Q0C1 308 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 THSD4Q6ZMP0 1018 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 SLC16A14Q7RTX9 510 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 MDP1Q86V88 176 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 JAZF1Q86VZ6 243 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 CLDN22Q8N7P3 220 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 OR10G2Q8NGC3 310 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 GIPC3Q8TF64 312 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 TMEM171Q8WVE6 324 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 RASD2Q96D21 266 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 GPA33Q99795 319 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 FOXC2Q99958 501 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 IFT27Q9BW83 186 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 DGCR6LQ9BY27 220 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 RNF121Q9H920 327 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 SIAEQ9HAT2 523 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 DNAJB9Q9UBS3 223 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 IL20RAQ9UHF4 553 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 IER3IP1Q9Y5U9 82 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 ATP23Q9Y6H3 246 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 USF3Q68DE3 2245 aa9.5□□□□□ -0.89
CHMP3-205ENST00000409810 SLC22A23A1A5C7 686 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 SOCS2O14508 198 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 ARPC3O15145 178 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 IDH3BO43837 385 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 SMPD2O60906 423 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 PPP1R3DO95685 299 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 TXNDC12O95881 172 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 RENP00797 406 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 PTHP01270 115 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 GASTP01350 101 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 FCGR1AP12314 374 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 GIPRP48546 466 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 ART1P52961 327 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 FXYD6P3P58550 94 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 RAB1AP62820 205 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 FMODQ06828 376 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 SPOCK1Q08629 439 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 PPP1R8Q12972 351 aaKnown RBP9.49□□□□□ -0.89
CHMP3-205ENST00000409810 AGAP6Q5VW22 663 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 ZNF770Q6IQ21 691 aaPredicted RBP9.49□□□□□ -0.89
CHMP3-205ENST00000409810 ZNF544Q6NX49 715 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 RASSF6Q6ZTQ3 369 aa9.49□□□□□ -0.89
CHMP3-205ENST00000409810 ASRGL1Q7L266 308 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms