RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 FBXL2Q9UKC9 423 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 CLEC4AQ9UMR7 237 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 COA3Q9Y2R0 106 aaPredicted RBP18.06■□□□□ 0.48
USP39-204ENST00000409766 HS3ST3B1Q9Y662 390 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 EML6Q6ZMW3 1958 aa18.06■□□□□ 0.48
USP39-204ENST00000409766 TMEM221A6NGB7 291 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 CENPBD1B2RD01 187 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 NPIPA5E9PKD4 350 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 M0R296 226 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 ZNF254O75437 659 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 CCNKO75909 580 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 SPARCP09486 303 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 HSF1Q00613 529 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 RASGEF1BQ0VAM2 473 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 CBX3Q13185 183 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 ZNF57Q68EA5 555 aaPredicted RBP18.05■□□□□ 0.48
USP39-204ENST00000409766 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.05■□□□□ 0.48
USP39-204ENST00000409766 WDSUB1Q8N9V3 476 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 LGALS14Q8TCE9 139 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 C4orf45Q96LM5 186 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 CMTM3Q96MX0 182 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 FRMD6Q96NE9 622 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 KCNK17Q96T54 332 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 COMMD4Q9H0A8 199 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 NPIPA1Q9UND3 350 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 B3GALT5Q9Y2C3 310 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 PCDHGA9Q9Y5G4 932 aaKnown RBP18.05■□□□□ 0.48
USP39-204ENST00000409766 COL27A1Q8IZC6 1860 aaPredicted RBP18.05■□□□□ 0.48
USP39-204ENST00000409766 A0A0B4J293 547 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 TMEM127O75204 238 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 ZNF432O94892 652 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 LDOC1O95751 146 aaPredicted RBP18.05■□□□□ 0.48
USP39-204ENST00000409766 ACP1P24666 158 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 PTGS2P35354 604 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 KIR3DL2P43630 455 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 POU3F1Q03052 451 aaPredicted RBP18.05■□□□□ 0.48
USP39-204ENST00000409766 MYBPHQ13203 477 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 EXT1Q16394 746 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 TEX30Q5JUR7 227 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 PLET1Q6UQ28 207 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 STAC2Q6ZMT1 411 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 ZNF433Q8N7K0 673 aaPredicted RBP18.05■□□□□ 0.48
USP39-204ENST00000409766 ZNF676Q8N7Q3 588 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 OR2Y1Q8NGV0 311 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 OR6F1Q8NGZ6 308 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 ZNF671Q8TAW3 534 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 SLC39A1Q9NY26 324 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 V9GY05 133 aa18.05■□□□□ 0.48
USP39-204ENST00000409766 BDP1A6H8Y1 2624 aa18.04■□□□□ 0.48
USP39-204ENST00000409766 UBL3O95164 117 aa18.04■□□□□ 0.48
USP39-204ENST00000409766 NR4A2P43354 598 aa18.04■□□□□ 0.48
USP39-204ENST00000409766 SOX2P48431 317 aa18.04■□□□□ 0.48
USP39-204ENST00000409766 WDR38Q5JTN6 314 aa18.04■□□□□ 0.48
USP39-204ENST00000409766 HES5Q5TA89 166 aa18.04■□□□□ 0.48
USP39-204ENST00000409766 GLCCI1Q86VQ1 547 aa18.04■□□□□ 0.48
USP39-204ENST00000409766 FADS6Q8N9I5 356 aa18.04■□□□□ 0.48
USP39-204ENST00000409766 OR10AC1Q8NH08 325 aa18.04■□□□□ 0.48
USP39-204ENST00000409766 ADAMTS14Q8WXS8 1223 aa18.04■□□□□ 0.48
USP39-204ENST00000409766 TCF7L1Q9HCS4 588 aa18.04■□□□□ 0.48
USP39-204ENST00000409766 SERINC1Q9NRX5 453 aa18.04■□□□□ 0.48
USP39-204ENST00000409766 TRBV5-7A0A0A0MS05 114 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 FAM240BA0A1B0GVZ2 78 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 TP53I11O14683 189 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 MPZL1O95297 269 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 RAF1P04049 648 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 CCR9P51686 369 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 C19orf57Q0VDD7 668 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 SNTA1Q13424 505 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 UBE2NLQ5JXB2 153 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 FAM205BPQ63HN1 556 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 TCEAL6Q6IPX3 200 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 C3orf33Q6P1S2 294 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 DBX2Q6ZNG2 339 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 SLC26A10Q8NG04 563 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 OR51A4Q8NGJ6 313 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 M1APQ8TC57 530 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 GPR148Q8TDV2 347 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 RNF128Q8TEB7 428 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 TCEAL3Q969E4 200 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 C5orf34Q96MH7 638 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 ABHD6Q9BV23 337 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 MED29Q9NX70 200 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 NLKQ9UBE8 527 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 A0A1W2PNV4 684 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 EEF1E1O43324 174 aaKnown RBP18.03■□□□□ 0.48
USP39-204ENST00000409766 ADRA2CP18825 462 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 DPP4P27487 766 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 FOXK1P85037 733 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 FMODQ06828 376 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 KCTD18Q6PI47 426 aaPredicted RBP18.03■□□□□ 0.48
USP39-204ENST00000409766 NHLRC1Q6VVB1 395 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 ESPNLQ6ZVH7 1005 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 LRRTM1Q86UE6 522 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 ZNF454Q8N9F8 522 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 ZBTB44Q8NCP5 570 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 SLITRK2Q9H156 845 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 B3GAT1Q9P2W7 334 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 CAMK2AQ9UQM7 478 aa18.03■□□□□ 0.48
USP39-204ENST00000409766 GPR171O14626 319 aa18.02■□□□□ 0.48
USP39-204ENST00000409766 TCEA1P23193 301 aaKnown RBP18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms