RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 SLC16A14Q7RTX9 510 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 PRIMA1Q86XR5 153 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 NRMQ8IXM6 262 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 CDK20Q8IZL9 346 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 NEU4Q8WWR8 484 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 ACOT11Q8WXI4 607 aaPredicted RBP16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 FAM162AQ96A26 154 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 NMD3Q96D46 503 aaKnown RBP16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 PIMREGQ9BSJ6 248 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 FAM107BQ9H098 131 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 RNF121Q9H920 327 aa16.91■□□□□ 0.3
TSPAN4-209ENST00000409543 YLPM1P49750 1951 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 GMNCA6NCL1 334 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 IGFBP1P08833 259 aaPredicted RBP16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 SAGP10523 405 aaPredicted RBP16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 NR2C1P13056 603 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 NCK1P16333 377 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 NR4A2P43354 598 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 RPS23P62266 143 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 MSMPQ1L6U9 139 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 GKAP1Q5VSY0 366 aaPredicted RBP16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 CPLX4Q7Z7G2 160 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 HDAC2Q92769 488 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 FOXN4Q96NZ1 517 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 KCNK17Q96T54 332 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 MRPL37Q9BZE1 423 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 C1orf198Q9H425 327 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 SIAEQ9HAT2 523 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 DYNLRB1Q9NP97 96 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 SPAG4Q9NPE6 437 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 SLC7A8Q9UHI5 535 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 RPS6KA6Q9UK32 745 aa16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 ANK3Q12955 4377 aaKnown RBP16.9■□□□□ 0.3
TSPAN4-209ENST00000409543 CHD3Q12873 2000 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 A0A087WUU8 490 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 SH3PXD2BA1X283 911 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 A8MV72 311 aaPredicted RBP16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 EFCAB9A8MZ26 197 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 PTHP01270 115 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 IGHMP01871 453 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 RPL27P61353 136 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 MRPS34P82930 218 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 FHL1Q13642 323 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 CARTPTQ16568 116 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 ZNF730Q6ZMV8 503 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 MBOAT2Q6ZWT7 520 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 OAFQ86UD1 273 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 CYP4Z1Q86W10 505 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 ZCCHC24Q8N2G6 241 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 LRRC75AQ8NAA5 344 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 SLC30A7Q8NEW0 376 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 OR51A7Q8NH64 312 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 ALG12Q9BV10 488 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 ANKRD19PQ9H560 264 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 ZNF346Q9UL40 294 aaKnown RBP16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 UGT2A1Q9Y4X1 527 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 ENPP4Q9Y6X5 453 aa16.89■□□□□ 0.29
TSPAN4-209ENST00000409543 SLC22A23A1A5C7 686 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 SYNGR3O43761 229 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 SLC2A10O95528 541 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 ADRA2AP08913 450 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 SLC9A3P48764 834 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 CTXN1P60606 82 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 CD47Q08722 323 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 TOP3AQ13472 1001 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 THEM4Q5T1C6 240 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 C6orf52Q5T4I8 152 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 FAM205BPQ63HN1 556 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 SLC25A47Q6Q0C1 308 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 TBPL2Q6SJ96 375 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 TMPRSS11FQ6ZWK6 438 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 TSEN54Q7Z6J9 526 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 MEX3DQ86XN8 651 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 ZNF540Q8NDQ6 660 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 RBM15BQ8NDT2 890 aaKnown RBP16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 FNDC8Q8TC99 324 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 KCNN2Q9H2S1 579 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 NMNAT1Q9HAN9 279 aaPredicted RBP16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 ADA2Q9NZK5 511 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 ADAM21Q9UKJ8 722 aa16.88■□□□□ 0.29
TSPAN4-209ENST00000409543 TRAV27A0A087WT01 109 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 STAMBPO95630 424 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 SNAP29O95721 258 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 MMP7P09237 267 aaPredicted RBP16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 DAOP14920 347 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 CDAP32320 146 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 PLP2Q04941 152 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 FMODQ06828 376 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 GGTLC2Q14390 218 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 CYB5R2Q6BCY4 276 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 GLYATQ6IB77 296 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 RRM2BQ7LG56 351 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 IGFN1Q86VF2 1251 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 HIPK1Q86Z02 1210 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 LRRC18Q8N456 261 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 FAM156AQ8NDB6 213 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 OR1J2Q8NGS2 313 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 OR13C2Q8NGS9 318 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 RBP7Q96R05 134 aa16.87■□□□□ 0.29
TSPAN4-209ENST00000409543 MS4A5Q9H3V2 200 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms