RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PMM1Q92871 262 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 CDS1Q92903 461 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 SLC38A2Q96QD8 506 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 QRSL1Q9H0R6 528 aaKnown RBP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 SLCO5A1Q9H2Y9 848 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 PIGUQ9H490 435 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 FGF20Q9NP95 211 aaPredicted RBP11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ISYNA1Q9NPH2 558 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 NDUFB11Q9NX14 153 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ZNF232Q9UNY5 417 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 UGT2A1Q9Y4X1 527 aa11.25□□□□□ -0.61
CHRNA1-205ENST00000409542 ALPK2Q86TB3 2170 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 CPSF4LA6NMK7 179 aaKnown RBP11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 EIF1AYO14602 144 aaKnown RBP11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 MYL12BO14950 172 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 PHF1O43189 567 aaPredicted RBP11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 PRODHO43272 600 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 SS18L1O75177 396 aaPredicted RBP11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 GPX5O75715 221 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 UPK1BO75841 260 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 AK1P00568 194 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 IFNA2P01563 188 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 ACP2P11117 423 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 IL11P20809 199 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 RPS4Y1P22090 263 aaKnown RBP11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 S100A5P33763 92 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 EIF1AXP47813 144 aaKnown RBP11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 RPS3AP61247 264 aaKnown RBP11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 RAB40BQ12829 278 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 DOC2BQ14184 412 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 LARS2Q15031 903 aaKnown RBP11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 SNAPC1Q16533 368 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 TYW3Q6IPR3 259 aaKnown RBP11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 APOOLQ6UXV4 268 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 PLEKHG7Q6ZR37 379 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 CLDN22Q8N7P3 220 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 SLC16A11Q8NCK7 471 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 OR9Q1Q8NGQ5 310 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 OSTF1Q92882 214 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 ADGRG7Q96K78 797 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 LRR1Q96L50 414 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 MCHR1Q99705 422 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 KLHDC3Q9BQ90 382 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 ZNF350Q9GZX5 532 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 SAP130Q9H0E3 1048 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 ARMC7Q9H6L4 198 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 EVA1AQ9H8M9 152 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 MED17Q9NVC6 651 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 CLEC2DQ9UHP7 191 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 GDF2Q9UK05 429 aaPredicted RBP11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 STUB1Q9UNE7 303 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 EMC9Q9Y3B6 208 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 WDR45Q9Y484 360 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 OR10H1Q9Y4A9 318 aa11.24□□□□□ -0.61
CHRNA1-205ENST00000409542 TMEM129A0AVI4 362 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 FRS3O43559 492 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 PLOD3O60568 738 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 FCMRO60667 390 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 LSM11P83369 360 aaKnown RBP eCLIP11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 DUSP5Q16690 384 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 PGGHGQ32M88 737 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 NCMAPQ5T1S8 102 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 ADAM5Q6NVV9 412 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 ZNF836Q6ZNA1 936 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 MBOAT2Q6ZWT7 520 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 RRM2BQ7LG56 351 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 CLIP4Q8N3C7 705 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 PIP4P2Q8N4L2 257 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 OR8D4Q8NGM9 314 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 S100PBPQ96BU1 408 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 ZG16BQ96DA0 208 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 TRMT61AQ96FX7 289 aaKnown RBP11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 SLC41A3Q96GZ6 507 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 GMPPAQ96IJ6 420 aaPredicted RBP11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 STACQ99469 402 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 SDF2Q99470 211 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 TEX12Q9BXU0 123 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 PRRG4Q9BZD6 226 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 PLA2G12AQ9BZM1 189 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 C6orf62Q9GZU0 229 aaPredicted RBP11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 RNF167Q9H6Y7 350 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 EGLN3Q9H6Z9 239 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 C12orf49Q9H741 205 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 SP140LQ9H930 580 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 KRCC1Q9NPI7 259 aaPredicted RBP11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 CTPS2Q9NRF8 586 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 DUSP22Q9NRW4 184 aa11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 CRNNQ9UBG3 495 aaPredicted RBP11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 EXOSC1Q9Y3B2 195 aaKnown RBP11.23□□□□□ -0.61
CHRNA1-205ENST00000409542 CADP27708 2225 aa11.22□□□□□ -0.61
CHRNA1-205ENST00000409542 FREM1Q5H8C1 2179 aa11.22□□□□□ -0.61
CHRNA1-205ENST00000409542 PNMA8CA0A1B0GUJ8 204 aa11.22□□□□□ -0.61
CHRNA1-205ENST00000409542 LINC01387J3KSC0 135 aa11.22□□□□□ -0.61
CHRNA1-205ENST00000409542 CXCL13O43927 109 aa11.22□□□□□ -0.61
CHRNA1-205ENST00000409542 CD8AP01732 235 aa11.22□□□□□ -0.61
CHRNA1-205ENST00000409542 DBIP07108 87 aaKnown RBP11.22□□□□□ -0.61
CHRNA1-205ENST00000409542 CPEP16870 476 aa11.22□□□□□ -0.61
CHRNA1-205ENST00000409542 MYL12AP19105 171 aa11.22□□□□□ -0.61
CHRNA1-205ENST00000409542 PSMA1P25786 263 aaKnown RBP11.22□□□□□ -0.61
CHRNA1-205ENST00000409542 CRYBB2P43320 205 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms