RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 OR2L8Q8NGY9 312 aa14.03□□□□□ -0.16
LIMS2-205ENST00000409455 C2CD4CQ8TF44 421 aa14.03□□□□□ -0.16
LIMS2-205ENST00000409455 CDX2Q99626 313 aaPredicted RBP14.03□□□□□ -0.16
LIMS2-205ENST00000409455 SLC25A21Q9BQT8 299 aaPredicted RBP14.03□□□□□ -0.16
LIMS2-205ENST00000409455 TIMM29Q9BSF4 260 aa14.03□□□□□ -0.16
LIMS2-205ENST00000409455 GPR174Q9BXC1 333 aa14.03□□□□□ -0.16
LIMS2-205ENST00000409455 ZFP57Q9NU63 452 aa14.03□□□□□ -0.16
LIMS2-205ENST00000409455 MKL2Q9ULH7 1088 aa14.03□□□□□ -0.16
LIMS2-205ENST00000409455 LRRC72A6NJI9 287 aa14.02□□□□□ -0.16
LIMS2-205ENST00000409455 ALKBH1Q13686 389 aaKnown RBP14.02□□□□□ -0.16
LIMS2-205ENST00000409455 ATXN7L3Q14CW9 347 aaPredicted RBP14.02□□□□□ -0.16
LIMS2-205ENST00000409455 TRMT12Q53H54 448 aaKnown RBP14.02□□□□□ -0.16
LIMS2-205ENST00000409455 OR4N5Q8IXE1 308 aa14.02□□□□□ -0.16
LIMS2-205ENST00000409455 ZNF614Q8N883 585 aa14.02□□□□□ -0.16
LIMS2-205ENST00000409455 NPEPL1Q8NDH3 523 aa14.02□□□□□ -0.16
LIMS2-205ENST00000409455 ZNF417Q8TAU3 575 aa14.02□□□□□ -0.16
LIMS2-205ENST00000409455 Q96M85 177 aa14.02□□□□□ -0.16
LIMS2-205ENST00000409455 PTCHD1Q96NR3 888 aa14.02□□□□□ -0.16
LIMS2-205ENST00000409455 ZNF426Q9BUY5 554 aa14.02□□□□□ -0.16
LIMS2-205ENST00000409455 RXFP3Q9NSD7 469 aa14.02□□□□□ -0.16
LIMS2-205ENST00000409455 FLRT3Q9NZU0 649 aa14.02□□□□□ -0.16
LIMS2-205ENST00000409455 CA14Q9ULX7 337 aa14.02□□□□□ -0.16
LIMS2-205ENST00000409455 ENTPD2Q9Y5L3 495 aa14.02□□□□□ -0.16
LIMS2-205ENST00000409455 A0A1B0GTI1 187 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 PRSS38A1L453 326 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 RNF222A6NCQ9 220 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 OR2AT4A6NND4 320 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 SMAD9O15198 467 aaKnown RBP14.02□□□□□ -0.17
LIMS2-205ENST00000409455 OR8G3PP0DMU2 310 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 HNRNPA2B1P22626 353 aaKnown RBP14.02□□□□□ -0.17
LIMS2-205ENST00000409455 CD34P28906 385 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 KCNJ3P48549 501 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 NR0B1P51843 470 aaKnown RBP14.02□□□□□ -0.17
LIMS2-205ENST00000409455 TAS2R19P59542 299 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 VWA2Q5GFL6 755 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 PTCRAQ6ISU1 281 aaPredicted RBP14.02□□□□□ -0.17
LIMS2-205ENST00000409455 FAM122BQ7Z309 247 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 RD3Q7Z3Z2 195 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 GABRG1Q8N1C3 465 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 OR2L3Q8NG85 312 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 CCDC74AQ96AQ1 378 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 SCARF2Q96GP6 870 aaPredicted RBP14.02□□□□□ -0.17
LIMS2-205ENST00000409455 DUSP22Q9NRW4 184 aa14.02□□□□□ -0.17
LIMS2-205ENST00000409455 CARHSP1Q9Y2V2 147 aaKnown RBP14.02□□□□□ -0.17
LIMS2-205ENST00000409455 TRAV8-7A0A075B6U6 113 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-205ENST00000409455 OR52A4PA6NMU1 304 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 PRR32B1ATL7 298 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 SULT1C2O00338 296 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 GLAP06280 429 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 EFNB2P52799 333 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 NKAIN2Q5VXU1 208 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 C3orf33Q6P1S2 294 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 MFSD9Q8NBP5 474 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 OR51D1Q8NGF3 324 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 OR1J2Q8NGS2 313 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 RNF166Q96A37 237 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-205ENST00000409455 MYEF2Q9P2K5 600 aaKnown RBP14.01□□□□□ -0.17
LIMS2-205ENST00000409455 NOP16Q9Y3C1 178 aaKnown RBP14.01□□□□□ -0.17
LIMS2-205ENST00000409455 TRBV5-5A0A0J9YX44 114 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 PRR19A6NJB7 356 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 FADS1O60427 444 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 CDC40O60508 579 aaKnown RBP eCLIP14.01□□□□□ -0.17
LIMS2-205ENST00000409455 SRPX2O60687 465 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-205ENST00000409455 RAB3DO95716 219 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 SEMA4FO95754 770 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 WNT11O96014 354 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 CRYBA1P05813 215 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 ZNF684Q5T5D7 378 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 LIPNQ5VXI9 398 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 TMEM71Q6P5X7 295 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 TMEM205Q6UW68 189 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 DPY19L2P2Q6ZN68 376 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 GTPBP8Q8N3Z3 284 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-205ENST00000409455 CDRT4Q8N9R6 151 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 INO80EQ8NBZ0 244 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-205ENST00000409455 PPP1R1CQ8WVI7 109 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 OR1E3Q8WZA6 343 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 ARL11Q969Q4 196 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 TSACCQ96A04 125 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-205ENST00000409455 TMEM106AQ96A25 262 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 LMAN1LQ9HAT1 526 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 FRRS1LQ9P0K9 344 aa14.01□□□□□ -0.17
LIMS2-205ENST00000409455 C19orf53Q9UNZ5 99 aaPredicted RBP14.01□□□□□ -0.17
LIMS2-205ENST00000409455 IMPA2O14732 288 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 RAD1O60671 282 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 EIF3GO75821 320 aaKnown RBP eCLIP14□□□□□ -0.17
LIMS2-205ENST00000409455 GLCEO94923 617 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 HOXC4P09017 264 aaPredicted RBP14□□□□□ -0.17
LIMS2-205ENST00000409455 ZNF888P0CJ79 500 aaPredicted RBP14□□□□□ -0.17
LIMS2-205ENST00000409455 CASRP41180 1078 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 POU3F4P49335 361 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 RGS19P49795 217 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 PLAURQ03405 335 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 SRSF4Q08170 494 aaKnown RBP14□□□□□ -0.17
LIMS2-205ENST00000409455 DHRS2Q13268 280 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 FAM209BQ5JX69 171 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 C10orf91Q5T1B1 145 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 DMBX1Q8NFW5 382 aa14□□□□□ -0.17
LIMS2-205ENST00000409455 ZPLD1Q8TCW7 415 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms