RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 FAM27E3Q08E93 113 aa12.42□□□□□ -0.42
CHRNA1-204ENST00000409323 FAM205BPQ63HN1 556 aa12.42□□□□□ -0.42
CHRNA1-204ENST00000409323 ADCK1Q86TW2 530 aa12.42□□□□□ -0.42
CHRNA1-204ENST00000409323 CXorf67Q86X51 503 aaPredicted RBP12.42□□□□□ -0.42
CHRNA1-204ENST00000409323 PTP4A1Q93096 173 aa12.42□□□□□ -0.42
CHRNA1-204ENST00000409323 NMD3Q96D46 503 aaKnown RBP12.42□□□□□ -0.42
CHRNA1-204ENST00000409323 MUS81Q96NY9 551 aa12.42□□□□□ -0.42
CHRNA1-204ENST00000409323 DDOQ99489 341 aa12.42□□□□□ -0.42
CHRNA1-204ENST00000409323 PITX2Q99697 317 aa12.42□□□□□ -0.42
CHRNA1-204ENST00000409323 ANKRD60Q9BZ19 345 aa12.42□□□□□ -0.42
CHRNA1-204ENST00000409323 DNAJC27Q9NZQ0 273 aa12.42□□□□□ -0.42
CHRNA1-204ENST00000409323 KLHL21Q9UJP4 597 aa12.42□□□□□ -0.42
CHRNA1-204ENST00000409323 PRR14LQ5THK1 2151 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 A0A1W2PR80 420 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 A8MXE2 369 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 ZNF587BE7ETH6 402 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 PRR23D1E9PI22 279 aaPredicted RBP12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 RAD51DO75771 328 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 IL18BPO95998 194 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 PRR23D2P0DMB1 279 aaPredicted RBP12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 CD8BP10966 210 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 CDC42P60953 191 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 IL5RAQ01344 420 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 HIST3H3Q16695 136 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 MEP1BQ16820 701 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 KLHL12Q53G59 568 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 USP51Q70EK9 711 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 CXXC5Q7LFL8 322 aaKnown RBP12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 HDDC2Q7Z4H3 204 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 ENTHD1Q8IYW4 607 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 POMGNT2Q8NAT1 580 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 RBP7Q96R05 134 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 ALG12Q9BV10 488 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 TEX12Q9BXU0 123 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 SEC61A2Q9H9S3 476 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 GALNT8Q9NY28 637 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 VSX1Q9NZR4 365 aaPredicted RBP12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 MALT1Q9UDY8 824 aa12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 COA3Q9Y2R0 106 aaPredicted RBP12.41□□□□□ -0.42
CHRNA1-204ENST00000409323 TVP23AA6NH52 213 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 SLC16A6O15403 523 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 DHHO43323 396 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 SCG5P05408 212 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 B4GALT1P15291 398 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 ARF1P84077 181 aaKnown RBP12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 ALKBH2Q6NS38 261 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 SLC25A47Q6Q0C1 308 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 UGT2A3Q6UWM9 527 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 Q6ZT83 130 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 GABRG1Q8N1C3 465 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 PROKR2Q8NFJ6 384 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 OR6K6Q8NGW6 343 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 LILRB4Q8NHJ6 448 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 CNIH3Q8TBE1 160 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 TMEM163Q8TC26 289 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 LRR1Q96L50 414 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 LINC00470Q9BZP3 86 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 PIGMQ9H3S5 423 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 B3GAT2Q9NPZ5 323 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 UBAP1Q9NZ09 502 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 B9D1Q9UPM9 204 aa12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 SPTBN1Q01082 2364 aaKnown RBP12.4□□□□□ -0.42
CHRNA1-204ENST00000409323 MSTNO14793 375 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 APOL3O95236 402 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 HLA-DQA2P01906 255 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 RPSAP08865 295 aaKnown RBP12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 SPI1P17947 270 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 RPS27P42677 84 aaKnown RBP12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 NUDT6P53370 316 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 RPS7P62081 194 aaKnown RBP12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 TUBA1BP68363 451 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 TUBA4AP68366 448 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 APOFQ13790 326 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 HIKESHIQ53FT3 197 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 THEM4Q5T1C6 240 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 ZNF691Q5VV52 312 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 MTFR2Q6P444 385 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 KLHL24Q6TFL4 600 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 BEND4Q6ZU67 534 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 TUBA1AQ71U36 451 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 LRRC18Q8N456 261 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 SMAP2Q8WU79 429 aaPredicted RBP12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 ASB5Q8WWX0 329 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 ZMYND19Q96E35 227 aaPredicted RBP12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 EMC7Q9NPA0 242 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 JKAMPQ9P055 326 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 UGT2A1Q9Y4X1 527 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 PCDHGB5Q9Y5G0 923 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 IGLV1-36A0A0B4J1U3 117 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 CIB4A0PJX0 185 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 PATE4P0C8F1 98 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 PAICSP22234 425 aaKnown RBP12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 MYF6P23409 242 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 EFNB1P98172 346 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 KEAP1Q14145 624 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 STK11Q15831 433 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 SGCAQ16586 387 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 SMN1Q16637 294 aaKnown RBP12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 TTC23Q5W5X9 447 aa12.39□□□□□ -0.43
CHRNA1-204ENST00000409323 STAC2Q6ZMT1 411 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms