RNA–Protein interactions for RNA: ENST00000409251.7

PTPRN-202, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 1 (best) BASIC

Gene PTPRN, Length 3,622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-202ENST00000409251 AICDAQ9GZX7 198 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 ZNF629Q9UEG4 869 aaPredicted RBP11.81□□□□□ -0.52
PTPRN-202ENST00000409251 MRPS2Q9Y399 296 aaKnown RBP11.81□□□□□ -0.52
PTPRN-202ENST00000409251 TICRRQ7Z2Z1 1910 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 GALR3O60755 368 aaPredicted RBP11.81□□□□□ -0.52
PTPRN-202ENST00000409251 ITGA10O75578 1167 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 RAB3DO95716 219 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 ZNF888P0CJ79 500 aaPredicted RBP11.81□□□□□ -0.52
PTPRN-202ENST00000409251 PI3P19957 117 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 TNFRSF4P43489 277 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 TAS2R43P59537 309 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 S100A10P60903 97 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 FZD5Q13467 585 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 NCMAPQ5T1S8 102 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 C3orf33Q6P1S2 294 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 OR1M1Q8NGA1 313 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 OR6N2Q8NGY6 317 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 RSC1A1Q92681 617 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 TMEM106AQ96A25 262 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 S100PBPQ96BU1 408 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 SLC25A38Q96DW6 304 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 Q96M85 177 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 CNN2Q99439 309 aaKnown RBP11.81□□□□□ -0.52
PTPRN-202ENST00000409251 TGIF2Q9GZN2 237 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 SVILO95425 2214 aa11.81□□□□□ -0.52
PTPRN-202ENST00000409251 MED12Q93074 2177 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 PLPP2O43688 288 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 ZFPL1O95159 310 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 HPP00738 406 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 NME2P22392 152 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 CPT2P23786 658 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 ADH6P28332 368 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 PGDP52209 483 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 FABP9Q0Z7S8 132 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 UBE3DQ7Z6J8 389 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 SLC35A4Q96G79 324 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 PGLYRP3Q96LB9 341 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 ADGRL4Q9HBW9 690 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 LHX9Q9NQ69 397 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 EXOSC3Q9NQT5 275 aaKnown RBP11.8□□□□□ -0.52
PTPRN-202ENST00000409251 GHRLQ9UBU3 117 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 APOBEC3BQ9UH17 382 aaKnown RBP11.8□□□□□ -0.52
PTPRN-202ENST00000409251 ZNF337Q9Y3M9 751 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 METTL12A8MUP2 240 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 TXNDC12O95881 172 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 UBBP0CG47 229 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 UBCP0CG48 685 aaKnown RBP11.8□□□□□ -0.52
PTPRN-202ENST00000409251 HAAOP46952 286 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 CDNFQ49AH0 187 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 SLC35D2Q76EJ3 337 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 ABHD13Q7L211 337 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 WBP1Q96G27 269 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 SELENOIQ9C0D9 397 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 NPDC1Q9NQX5 325 aaPredicted RBP11.8□□□□□ -0.52
PTPRN-202ENST00000409251 SLC22A7Q9Y694 548 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 TMEM82A0PJX8 343 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 CTSVO60911 334 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 ICOSLGO75144 302 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 NDUFB6O95139 128 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 ACAA1P09110 424 aaPredicted RBP11.8□□□□□ -0.52
PTPRN-202ENST00000409251 CDK5R1Q15078 307 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 DEFB133Q30KQ1 61 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 FAM180AQ6UWF9 173 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 ZNF600Q6ZNG1 722 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 SLC22A18ASQ8N1D0 253 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 OR51A4Q8NGJ6 313 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 CA5BP1Q8WTZ4 195 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 ELF4Q99607 663 aaPredicted RBP11.8□□□□□ -0.52
PTPRN-202ENST00000409251 CMKLR1Q99788 373 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 TMEM27Q9HBJ8 222 aa11.8□□□□□ -0.52
PTPRN-202ENST00000409251 ZNF443Q9Y2A4 671 aaPredicted RBP11.8□□□□□ -0.52
PTPRN-202ENST00000409251 CPMP14384 443 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 AKT2P31751 481 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 CD80P33681 288 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 FOXL2P58012 376 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 TRMT12Q53H54 448 aaKnown RBP11.79□□□□□ -0.52
PTPRN-202ENST00000409251 KLHL26Q53HC5 615 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 USP53Q70EK8 1073 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 CD300LFQ8TDQ1 290 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 SLC37A2Q8TED4 501 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 CNTNAP3BQ96NU0 1288 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 C19orf43Q9BQ61 176 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 CCDC3Q9BQI4 270 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 ZNF649Q9BS31 505 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 MENTQ9BUN1 341 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 FSCN3Q9NQT6 498 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 NDRG3Q9UGV2 375 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 ACAD8Q9UKU7 415 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 SLC17A4Q9Y2C5 497 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 SLC35A3Q9Y2D2 325 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 COLEC10Q9Y6Z7 277 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 TMEM218A2RU14 115 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 OR5K4A6NMS3 321 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 F13BP05160 661 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 DRD1P21728 446 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 CMPK1P30085 196 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 ID4P47928 161 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 CSNK1EP49674 416 aaKnown RBP11.79□□□□□ -0.52
PTPRN-202ENST00000409251 NFATC4Q14934 902 aa11.79□□□□□ -0.52
PTPRN-202ENST00000409251 ELAVL1Q15717 326 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms