RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 MIOXQ9UGB7 285 aa8.64□□□□□ -1.03
NIF3L1-202ENST00000409020 KIF25Q9UIL4 384 aa8.64□□□□□ -1.03
NIF3L1-202ENST00000409020 KCNE5Q9UJ90 142 aa8.64□□□□□ -1.03
NIF3L1-202ENST00000409020 PURGQ9UJV8 347 aaKnown RBP8.64□□□□□ -1.03
NIF3L1-202ENST00000409020 PACSIN3Q9UKS6 424 aa8.64□□□□□ -1.03
NIF3L1-202ENST00000409020 PLEKHA6Q9Y2H5 1048 aa8.64□□□□□ -1.03
NIF3L1-202ENST00000409020 RAP2CQ9Y3L5 183 aa8.64□□□□□ -1.03
NIF3L1-202ENST00000409020 NUP214P35658 2090 aaPredicted RBP8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 PNMA8CA0A1B0GUJ8 204 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 SCDO00767 359 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 TNFSF11O14788 317 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 PHYHO14832 338 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 ANKRD28O15084 1053 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 TCAPO15273 167 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 CFLARO15519 480 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 SIAH2O43255 324 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 TBX1O43435 398 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 EFNA2O43921 213 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 SCN2BO60939 215 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 GABARAPO95166 117 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 CGAP01215 116 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 ALDOCP09972 364 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 EPXP11678 715 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 CRABP1P29762 137 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 RPL3P39023 403 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 EIF1AXP47813 144 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 RPL14P50914 215 aaKnown RBP8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 CCR9P51686 369 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 CLDN8P56748 225 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 SORDQ00796 357 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 HSF2Q03933 536 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 FGL1Q08830 312 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 FOXF1Q12946 379 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 AQP6Q13520 282 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 GUSBP1Q15486 140 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 GPR139Q6DWJ6 353 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 ZCCHC12Q6PEW1 402 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 TEX261Q6UWH6 196 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 CAMKMTQ7Z624 323 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 HMGN2P46Q86SG4 172 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 SNX29P2Q8IUI4 249 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 DEFB107AQ8IZN7 70 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 GTPBP8Q8N3Z3 284 aaPredicted RBP8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 CELF2-AS1Q8N7Q2 184 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 OR56A1Q8NGH5 318 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 OR10D3Q8NH80 312 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 ADAMTS15Q8TE58 950 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 SFT2D1Q8WV19 159 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 HYLS1Q96M11 299 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 ZFP3Q96NJ6 502 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 STACQ99469 402 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 CCDC32Q9BV29 185 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 ACTRT3Q9BYD9 372 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 MYOZ1Q9NP98 299 aaPredicted RBP8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 NIT2Q9NQR4 276 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 ASIC5Q9NY37 505 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 ST6GALNAC2Q9UJ37 374 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 U3KQ87 197 aa8.63□□□□□ -1.03
NIF3L1-202ENST00000409020 A0A0J9YW62 118 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 RNF103-CHMP3A0A140T963 221 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 MEIOCA2RUB1 952 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 AGAP5A6NIR3 686 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 ZNF879B4DU55 563 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 NPIPB9F8W1W9 429 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 CXCL13O43927 109 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 FCMRO60667 390 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 CNOT4O95628 575 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 IFNA2P01563 188 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 IFNA10P01566 189 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 SBK2P0C263 348 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 CD36P16671 472 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 ZNF17P17021 662 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 GNG10P50151 68 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 NFYCQ13952 458 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 DAZAP2Q15038 168 aaPredicted RBP8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 GPR68Q15743 365 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 NEDD8Q15843 81 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 ETFDHQ16134 617 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 ZIK1Q3SY52 487 aaPredicted RBP8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 SLC36A3Q495N2 470 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 GLYR1Q49A26 553 aaPredicted RBP8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 SPANXN4Q5MJ08 99 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 DDI2Q5TDH0 399 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 LIPNQ5VXI9 398 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 SPNS3Q6ZMD2 512 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 CHMP1BQ7LBR1 199 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 PIWIL3Q7Z3Z3 882 aaKnown RBP8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 C6orf120Q7Z4R8 191 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 OR6X1Q8NH79 312 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 PHOSPHO1Q8TCT1 267 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 DYNC2LI1Q8TCX1 351 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 SFXN5Q8TD22 340 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 LRRC46Q96FV0 321 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 HDHD5Q9BXW7 423 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 RIMS4Q9H426 269 aaPredicted RBP8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 KLHL28Q9NXS3 571 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 NDUFAF4Q9P032 175 aa8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 MARCOQ9UEW3 520 aaPredicted RBP8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 FOXD3Q9UJU5 478 aaPredicted RBP8.62□□□□□ -1.03
NIF3L1-202ENST00000409020 NSD1Q96L73 2696 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms