RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 C1QTNF6Q9BXI9 259 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 ACOXLQ9NUZ1 547 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 A0A096LPE4 126 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 A0A1W2PPZ6 126 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 OR5H15A6NDH6 313 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 SLC22A20A6NK97 555 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 ANKRD30BLA7E2S9 258 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 MASP2O00187 686 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 DPM1O60762 260 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 IGKV1D-16P01601 117 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 CD3GP09693 182 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 SMIM18P0DKX4 95 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 GTF2F2P13984 249 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 VAMP1P23763 118 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 OPRL1P41146 370 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 RAB14P61106 215 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 ECH1Q13011 328 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 ZNF528Q3MIS6 628 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 SYT6Q5T7P8 510 aaPredicted RBP8.22□□□□□ -1.09
LIG4-202ENST00000405925 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.22□□□□□ -1.09
LIG4-202ENST00000405925 ZNF584Q8IVC4 421 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 CLDN22Q8N7P3 220 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 EXD3Q8N9H8 876 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 OR5T2Q8NGG2 359 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 OR5L1Q8NGL2 311 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 GINS4Q9BRT9 223 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 PAPOLGQ9BWT3 736 aaKnown RBP8.22□□□□□ -1.09
LIG4-202ENST00000405925 AICDAQ9GZX7 198 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 ABCG5Q9H222 651 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 SLC6A15Q9H2J7 730 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 NIPAL2Q9H841 368 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 SYNPO2LQ9H987 977 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 POLE4Q9NR33 117 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 PLCXD1Q9NUJ7 323 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 SLC5A6Q9Y289 635 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 MED12Q93074 2177 aa8.22□□□□□ -1.09
LIG4-202ENST00000405925 TMEM129A0AVI4 362 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 PLSCR5A0PG75 271 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 FITM1A5D6W6 292 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 OIP5O43482 229 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 SGCEO43556 437 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 CRTAPO75718 401 aaPredicted RBP8.21□□□□□ -1.09
LIG4-202ENST00000405925 RAD51DO75771 328 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 SHC1P29353 583 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 SRD5A2P31213 254 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 GLP1RP43220 463 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 EFNA3P52797 238 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 ALKBH1Q13686 389 aaKnown RBP8.21□□□□□ -1.09
LIG4-202ENST00000405925 ABCA11PQ4W5N1 156 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 BORAQ6PGQ7 559 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 CPNE4Q96A23 557 aaPredicted RBP8.21□□□□□ -1.09
LIG4-202ENST00000405925 DDA1Q9BW61 102 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 DPAGT1Q9H3H5 408 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 CCDC86Q9H6F5 360 aaKnown RBP8.21□□□□□ -1.09
LIG4-202ENST00000405925 EXOSC3Q9NQT5 275 aaKnown RBP8.21□□□□□ -1.09
LIG4-202ENST00000405925 ZNF223Q9UK11 482 aaPredicted RBP8.21□□□□□ -1.09
LIG4-202ENST00000405925 CACNA1BQ00975 2339 aa8.21□□□□□ -1.09
LIG4-202ENST00000405925 A0A1B0GW55 424 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 CTDSP2O14595 271 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 DHHO43323 396 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 TBX6O95947 436 aaPredicted RBP8.21□□□□□ -1.1
LIG4-202ENST00000405925 DUX4L2P0CJ85 424 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 DUX4L3P0CJ86 424 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 DUX4L4P0CJ87 422 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 DUX4L5P0CJ88 424 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 DUX4L6P0CJ89 424 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 DUX4L7P0CJ90 424 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 CFL1P23528 166 aaKnown RBP8.21□□□□□ -1.1
LIG4-202ENST00000405925 ACP1P24666 158 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 CD82P27701 267 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 CLDN12P56749 244 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 LSAMPQ13449 338 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 HYAL4Q2M3T9 481 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 ZNF658BQ4V348 819 aaPredicted RBP8.21□□□□□ -1.1
LIG4-202ENST00000405925 THEM4Q5T1C6 240 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 CNIH2Q6PI25 160 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 XKRXQ6PP77 449 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 AKAP14Q86UN6 197 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 SLC38A9Q8NBW4 561 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 ABHD4Q8TB40 342 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 APOBEC4Q8WW27 367 aaKnown RBP8.21□□□□□ -1.1
LIG4-202ENST00000405925 HSD17B8Q92506 261 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 POTEKPQ9BYX7 375 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 MRPL15Q9P015 296 aaKnown RBP8.21□□□□□ -1.1
LIG4-202ENST00000405925 DUX4Q9UBX2 424 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 IL17BQ9UHF5 180 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 KCNG2Q9UJ96 466 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 KLK4Q9Y5K2 254 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 MTCL1Q9Y4B5 1905 aaKnown RBP8.21□□□□□ -1.1
LIG4-202ENST00000405925 PRR33A8MZF0 331 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 NCR1O76036 304 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 PIPP12273 146 aaPredicted RBP8.21□□□□□ -1.1
LIG4-202ENST00000405925 RGS19P49795 217 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 CLN3Q13286 438 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 PLCXD3Q63HM9 321 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 VASH1Q7L8A9 365 aaPredicted RBP8.21□□□□□ -1.1
LIG4-202ENST00000405925 NANOGP1Q8N7R0 232 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 FGF11Q92914 225 aa8.21□□□□□ -1.1
LIG4-202ENST00000405925 SLC35B4Q969S0 331 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms