RNA–Protein interactions for RNA: ENST00000405546.7

ATG4B-206, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 3,294 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-206ENST00000405546 TAF13Q15543 124 aa13.66□□□□□ -0.22
ATG4B-206ENST00000405546 B3GNTL1Q67FW5 361 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-206ENST00000405546 FAM220AQ7Z4H9 259 aa13.66□□□□□ -0.22
ATG4B-206ENST00000405546 TPRA1Q86W33 373 aa13.66□□□□□ -0.22
ATG4B-206ENST00000405546 OR6N2Q8NGY6 317 aa13.66□□□□□ -0.22
ATG4B-206ENST00000405546 OR2T27Q8NH04 317 aa13.66□□□□□ -0.22
ATG4B-206ENST00000405546 ZMAT3Q9HA38 289 aaKnown RBP13.66□□□□□ -0.22
ATG4B-206ENST00000405546 FBRSQ9HAH7 460 aa13.66□□□□□ -0.22
ATG4B-206ENST00000405546 GPN1Q9HCN4 374 aaPredicted RBP13.66□□□□□ -0.22
ATG4B-206ENST00000405546 ABCA7Q8IZY2 2146 aa13.66□□□□□ -0.22
ATG4B-206ENST00000405546 A0A1B0GUH1 482 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 SULT1C2O00338 296 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 SCDO00767 359 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 HCRTR2O43614 444 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 GPANK1O95872 356 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 TGM6O95932 706 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 MEOX2P50222 304 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 GFERP55789 205 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 POLR2GP62487 172 aaKnown RBP eCLIP13.65□□□□□ -0.22
ATG4B-206ENST00000405546 SRSF3P84103 164 aaKnown RBP13.65□□□□□ -0.22
ATG4B-206ENST00000405546 TDGQ13569 410 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 DEFB133Q30KQ1 61 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 MANEAQ5SRI9 462 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 SHISA6Q6ZSJ9 500 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 LDLRAD3Q86YD5 345 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 ALG12Q9BV10 488 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 URB1O60287 2271 aaKnown RBP13.65□□□□□ -0.22
ATG4B-206ENST00000405546 MPDZO75970 2070 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 CTNSO60931 367 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 FARS2O95363 451 aaKnown RBP13.65□□□□□ -0.22
ATG4B-206ENST00000405546 HPP00738 406 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 SPI1P17947 270 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 RPS4Y1P22090 263 aaKnown RBP13.65□□□□□ -0.22
ATG4B-206ENST00000405546 ACTA2P62736 377 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 ACTG2P63267 376 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 POU4F2Q12837 409 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 BIKQ13323 160 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 RBM39Q14498 530 aaKnown RBP13.65□□□□□ -0.22
ATG4B-206ENST00000405546 CDK5R1Q15078 307 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 OR7A5Q15622 319 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 TRAM1Q15629 374 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 ZNF546Q86UE3 836 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 LRRTM1Q86UE6 522 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 OR1S2Q8NGQ3 325 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 SLC25A38Q96DW6 304 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 ULBP3Q9BZM4 244 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 RXFP3Q9NSD7 469 aa13.65□□□□□ -0.22
ATG4B-206ENST00000405546 DHCR7Q9UBM7 475 aaKnown RBP13.65□□□□□ -0.22
ATG4B-206ENST00000405546 OR2M5A3KFT3 312 aa13.65□□□□□ -0.23
ATG4B-206ENST00000405546 C17orf51A8MQB3 221 aa13.65□□□□□ -0.23
ATG4B-206ENST00000405546 ECDO95905 644 aaPredicted RBP13.65□□□□□ -0.23
ATG4B-206ENST00000405546 P2RX1P51575 399 aa13.65□□□□□ -0.23
ATG4B-206ENST00000405546 FZD2Q14332 565 aa13.65□□□□□ -0.23
ATG4B-206ENST00000405546 PAN3Q58A45 887 aaKnown RBP13.65□□□□□ -0.23
ATG4B-206ENST00000405546 DMKNQ6E0U4 476 aaPredicted RBP13.65□□□□□ -0.23
ATG4B-206ENST00000405546 RAB12Q6IQ22 244 aa13.65□□□□□ -0.23
ATG4B-206ENST00000405546 CMIPQ8IY22 773 aa13.65□□□□□ -0.23
ATG4B-206ENST00000405546 ZNF676Q8N7Q3 588 aa13.65□□□□□ -0.23
ATG4B-206ENST00000405546 ZNF321PQ8N8H1 164 aa13.65□□□□□ -0.23
ATG4B-206ENST00000405546 OR51S1Q8NGJ8 323 aa13.65□□□□□ -0.23
ATG4B-206ENST00000405546 GPBAR1Q8TDU6 330 aa13.65□□□□□ -0.23
ATG4B-206ENST00000405546 SPSB2Q99619 263 aa13.65□□□□□ -0.23
ATG4B-206ENST00000405546 C7orf50Q9BRJ6 194 aaKnown RBP13.65□□□□□ -0.23
ATG4B-206ENST00000405546 GRHPRQ9UBQ7 328 aa13.65□□□□□ -0.23
ATG4B-206ENST00000405546 CDV3Q9UKY7 258 aaKnown RBP13.65□□□□□ -0.23
ATG4B-206ENST00000405546 SPAG17Q6Q759 2223 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 ZNF879B4DU55 563 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 SRMP19623 302 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 RAB13P51153 203 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 MRPS21P82921 87 aaKnown RBP13.64□□□□□ -0.23
ATG4B-206ENST00000405546 ALG10Q5BKT4 473 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 HLA-DQA1Q5Y7H0 255 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 MAMSTRQ6ZN01 415 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 CTHRC1Q96CG8 243 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 SMIM19Q96E16 107 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 DNTTIP1Q9H147 329 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 PURGQ9UJV8 347 aaKnown RBP13.64□□□□□ -0.23
ATG4B-206ENST00000405546 FANCMQ8IYD8 2048 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 SPTY2D1-AS1A0A0U1RR47 76 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 ZNF705EA8MWA4 302 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-206ENST00000405546 DOK2O60496 412 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 CT45A8P0DMV1 189 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 CT45A9P0DMV2 189 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 BLKP51451 505 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 SNRPEP62304 92 aaKnown RBP13.64□□□□□ -0.23
ATG4B-206ENST00000405546 SCRN3Q0VDG4 424 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 CT45A2Q5DJT8 189 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 ZNF626Q68DY1 528 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 HSD17B13Q7Z5P4 300 aaPredicted RBP13.64□□□□□ -0.23
ATG4B-206ENST00000405546 VSTM2LQ96N03 204 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 MOGAT1Q96PD6 335 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 PDCD10Q9BUL8 212 aa13.64□□□□□ -0.23
ATG4B-206ENST00000405546 RAB19A4D1S5 217 aa13.63□□□□□ -0.23
ATG4B-206ENST00000405546 WDPCPO95876 746 aa13.63□□□□□ -0.23
ATG4B-206ENST00000405546 BLOC1S1P78537 153 aa13.63□□□□□ -0.23
ATG4B-206ENST00000405546 CSRP2Q16527 193 aa13.63□□□□□ -0.23
ATG4B-206ENST00000405546 FAM199XQ6PEV8 388 aaPredicted RBP13.63□□□□□ -0.23
ATG4B-206ENST00000405546 TSSK4Q6SA08 328 aa13.63□□□□□ -0.23
ATG4B-206ENST00000405546 THAP6Q8TBB0 222 aa13.63□□□□□ -0.23
ATG4B-206ENST00000405546 PAQR8Q8TEZ7 354 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms