RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 ZNRF4Q8WWF5 429 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 HTRA1Q92743 480 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 RNASE6Q93091 150 aaKnown RBP14.01□□□□□ -0.17
HMGA1-204ENST00000401473 UBE2FQ969M7 185 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 RBP7Q96R05 134 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 ALG12Q9BV10 488 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 HCAR1Q9BXC0 346 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 FN3KQ9H479 309 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 SRA1Q9HD15 236 aaKnown RBP14.01□□□□□ -0.17
HMGA1-204ENST00000401473 ELOVL5Q9NYP7 299 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 TAS2R16Q9NYV7 291 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 TVP23BQ9NYZ1 205 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 GPR52Q9Y2T5 361 aa14.01□□□□□ -0.17
HMGA1-204ENST00000401473 FAM183AA6NL82 134 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 M0R129 80 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 DHHO43323 396 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 SEC14L2O76054 403 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 PSMB1P20618 241 aaKnown RBP14□□□□□ -0.17
HMGA1-204ENST00000401473 GRK5P34947 590 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 UGT2B10P36537 528 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 JAZF1Q86VZ6 243 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 PACRGLQ8N7B6 248 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 NSMAFQ92636 917 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 HRASLS5Q96KN8 279 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 RPRD1BQ9NQG5 326 aaKnown RBP14□□□□□ -0.17
HMGA1-204ENST00000401473 FAM118AQ9NWS6 357 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 SMPD3Q9NY59 655 aaPredicted RBP14□□□□□ -0.17
HMGA1-204ENST00000401473 ENOPH1Q9UHY7 261 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 ORC6Q9Y5N6 252 aa14□□□□□ -0.17
HMGA1-204ENST00000401473 HEATR1Q9H583 2144 aaKnown RBP14□□□□□ -0.17
HMGA1-204ENST00000401473 AHCYL1O43865 530 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 SLC16A7O60669 478 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 CLUP10909 449 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 CDAP32320 146 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 ARF1P84077 181 aaKnown RBP13.99□□□□□ -0.17
HMGA1-204ENST00000401473 GABRA6Q16445 453 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 C10orf128Q5T292 105 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 C12orf73Q69YU5 71 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 MUS81Q96NY9 551 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 NELFAQ9H3P2 528 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 MED20Q9H944 212 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 NDRG4Q9ULP0 352 aaKnown RBP13.99□□□□□ -0.17
HMGA1-204ENST00000401473 UGT2A1Q9Y4X1 527 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 HRNRQ86YZ3 2850 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-204ENST00000401473 ZNF99A8MXY4 864 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-204ENST00000401473 C16orf97H3BN30 126 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 PRKYO43930 277 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 RAD51DO75771 328 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 HMGN1P05114 100 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 SNAPC1Q16533 368 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 ABHD12BQ7Z5M8 362 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-204ENST00000401473 KISS1RQ969F8 398 aaPredicted RBP13.99□□□□□ -0.17
HMGA1-204ENST00000401473 FOXN4Q96NZ1 517 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 SNX18Q96RF0 628 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 NMNAT2Q9BZQ4 307 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 RERGLQ9H628 205 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 C8orf4Q9NR00 106 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 B9D1Q9UPM9 204 aa13.99□□□□□ -0.17
HMGA1-204ENST00000401473 A0A096LPE4 126 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 A0A1W2PPZ6 126 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 FAM171A2A8MVW0 826 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 GPANK1O95872 356 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 SCG5P05408 212 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 GYPBP06028 91 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 OTPQ5XKR4 325 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 ZNF627Q7L945 461 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 OR9Q1Q8NGQ5 310 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 FNDC8Q8TC99 324 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 RDH12Q96NR8 316 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 FOXB1Q99853 325 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 HDHD5Q9BXW7 423 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 B3GAT2Q9NPZ5 323 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 HINT3Q9NQE9 182 aaKnown RBP13.98□□□□□ -0.17
HMGA1-204ENST00000401473 KLHL21Q9UJP4 597 aa13.98□□□□□ -0.17
HMGA1-204ENST00000401473 COA3Q9Y2R0 106 aaPredicted RBP13.98□□□□□ -0.17
HMGA1-204ENST00000401473 KLF2Q9Y5W3 355 aaPredicted RBP13.98□□□□□ -0.17
HMGA1-204ENST00000401473 IGLV1-36A0A0B4J1U3 117 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 LOC100130705A0A1B0GUX0 176 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 CIB4A0PJX0 185 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 RIIAD1A6NNX1 92 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 SLC16A6O15403 523 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 TLX2O43763 284 aaPredicted RBP13.97□□□□□ -0.17
HMGA1-204ENST00000401473 RENP00797 406 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 PCYT1AP49585 367 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 HIKESHIQ53FT3 197 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 BHLHA15Q7RTS1 189 aaPredicted RBP13.97□□□□□ -0.17
HMGA1-204ENST00000401473 BCDIN3DQ7Z5W3 292 aaKnown RBP13.97□□□□□ -0.17
HMGA1-204ENST00000401473 ZBTB46Q86UZ6 589 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 CPOQ8IVL8 374 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 TCEANCQ8N8B7 351 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 OR51L1Q8NGJ5 315 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 OR1K1Q8NGR3 316 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 BCL2L2Q92843 193 aaPredicted RBP13.97□□□□□ -0.17
HMGA1-204ENST00000401473 S100PBPQ96BU1 408 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 MPZL1O95297 269 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 CLIC3O95833 236 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 IFNGP01579 166 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 B4GALT1P15291 398 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 ZNF3P17036 446 aa13.97□□□□□ -0.17
HMGA1-204ENST00000401473 COL8A1P27658 744 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms