RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 SSX3Q99909 188 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 TMEM100Q9NV29 134 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 GLTPQ9NZD2 209 aa16.66■□□□□ 0.26
COL18A1-204ENST00000400337 POM121CA8CG34 1229 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 IFNA17P01571 189 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 UBBP0CG47 229 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 AADACL3Q5VUY0 350 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 YRDCQ86U90 279 aaKnown RBP16.65■□□□□ 0.26
COL18A1-204ENST00000400337 LYSMD2Q8IV50 215 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 NKAIN3Q8N8D7 197 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 SGK3Q96BR1 496 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 RPS10P5Q9NQ39 176 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 ZNF254O75437 659 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 HSF1Q00613 529 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 FCRL6Q6DN72 434 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 C6orf15Q6UXA7 325 aaPredicted RBP16.65■□□□□ 0.26
COL18A1-204ENST00000400337 FCRL1Q96LA6 429 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 OR11A1Q9GZK7 315 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 WWTR1Q9GZV5 400 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 ICOSLGO75144 302 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 RRAS2P62070 204 aaPredicted RBP16.65■□□□□ 0.26
COL18A1-204ENST00000400337 DYRK1AQ13627 763 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 GLIPR1L1Q6UWM5 242 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 MRPL41Q8IXM3 137 aaKnown RBP16.65■□□□□ 0.26
COL18A1-204ENST00000400337 FAM71CQ8NEG0 241 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 OR1J2Q8NGS2 313 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 OCSTAMPQ9BR26 566 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 SLC17A4Q9Y2C5 497 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 SHOXO15266 292 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 ANKRD53Q8N9V6 530 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 PIGLQ9Y2B2 252 aa16.65■□□□□ 0.26
COL18A1-204ENST00000400337 TRABD2BA6NFA1 517 aa16.64■□□□□ 0.26
COL18A1-204ENST00000400337 GRB2P62993 217 aaKnown RBP16.64■□□□□ 0.26
COL18A1-204ENST00000400337 ACKR1Q16570 336 aa16.64■□□□□ 0.26
COL18A1-204ENST00000400337 PRSS45Q7RTY3 260 aa16.64■□□□□ 0.26
COL18A1-204ENST00000400337 ANGPTL5Q86XS5 388 aa16.64■□□□□ 0.26
COL18A1-204ENST00000400337 SLC25A46Q96AG3 418 aa16.64■□□□□ 0.26
COL18A1-204ENST00000400337 HRH4Q9H3N8 390 aa16.64■□□□□ 0.26
COL18A1-204ENST00000400337 HAO2Q9NYQ3 351 aa16.64■□□□□ 0.26
COL18A1-204ENST00000400337 COPS3Q9UNS2 423 aa16.64■□□□□ 0.26
COL18A1-204ENST00000400337 LPLP06858 475 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 NAGAP17050 411 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 SPI1P17947 270 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 CLVS2Q5SYC1 327 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 MAML2Q8IZL2 1156 aaPredicted RBP16.64■□□□□ 0.25
COL18A1-204ENST00000400337 LIPHQ8WWY8 451 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 CHST11Q9NPF2 352 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 DUSP13Q9UII6 198 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 PCDHGA5Q9Y5G8 931 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 DMWDQ09019 674 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 NMNAT2Q9BZQ4 307 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 EMC7Q9NPA0 242 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 RAB22AQ9UL26 194 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 ZNF346Q9UL40 294 aaKnown RBP16.64■□□□□ 0.25
COL18A1-204ENST00000400337 FABP7O15540 132 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 PRPH2P23942 346 aa16.64■□□□□ 0.25
COL18A1-204ENST00000400337 A0A087WV62 115 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 A0A1W2PS29 197 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 IFNA10P01566 189 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 SDHAP31040 664 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 PMPCAQ10713 525 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 FCN2Q15485 313 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 MSMO1Q15800 293 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 LIMS2Q7Z4I7 341 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 SMAP2Q8WU79 429 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-204ENST00000400337 SLC38A1Q9H2H9 487 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 MRPS2Q9Y399 296 aaKnown RBP16.63■□□□□ 0.25
COL18A1-204ENST00000400337 BCORQ6W2J9 1755 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 CDK5RAP2Q96SN8 1893 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 DEFB123Q8N688 67 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 LAT2Q9GZY6 243 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 PLCXD1Q9NUJ7 323 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 GNG12Q9UBI6 72 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 FBXO7Q9Y3I1 522 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 UGT2A1Q9Y4X1 527 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 A3GALT2U3KPV4 340 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 A0A1W2PNR3 127 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 K7EPK0 472 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 PPM1DO15297 605 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 NUPL2O15504 423 aaKnown RBP16.63■□□□□ 0.25
COL18A1-204ENST00000400337 CRYZL1O95825 349 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 PMP2P02689 132 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 NFYAP23511 347 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-204ENST00000400337 MC2RQ01718 297 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 Q6ZS52 159 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 FAM71E2Q8N5Q1 922 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 CDCA4Q9BXL8 241 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 C1orf123Q9NWV4 160 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 LILRB5O75023 590 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 GPX5O75715 221 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 STK17BO94768 372 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 ALKAL2Q6UX46 152 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 RAB39BQ96DA2 213 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 CHST2Q9Y4C5 530 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 DOCK2Q92608 1830 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 A0A0U1RQK1 487 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 MFGE8Q08431 387 aaPredicted RBP16.63■□□□□ 0.25
COL18A1-204ENST00000400337 DUSP21Q9H596 190 aa16.63■□□□□ 0.25
COL18A1-204ENST00000400337 STRCQ7RTU9 1775 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 SRP9P49458 86 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms