RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 IGLV3-27P01718 113 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 OR2T7P0C7T2 308 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 BAK1Q16611 211 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 C19orf35Q6ZS72 473 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 SLC16A14Q7RTX9 510 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 LIMS2Q7Z4I7 341 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 GLCCI1Q86VQ1 547 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 VRK3Q8IV63 474 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 HSD17B11Q8NBQ5 300 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 OR2T27Q8NH04 317 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 ELF4Q99607 663 aaPredicted RBP8.18□□□□□ -1.1
PTPRM-202ENST00000400053 ALG12Q9BV10 488 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 VN1R3Q9BXE9 311 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 ZNF768Q9H5H4 540 aaKnown RBP8.18□□□□□ -1.1
PTPRM-202ENST00000400053 ZNF331Q9NQX6 463 aaPredicted RBP8.18□□□□□ -1.1
PTPRM-202ENST00000400053 OR14J1Q9UGF5 321 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 PPT2Q9UMR5 302 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 PTRH2Q9Y3E5 179 aaKnown RBP8.18□□□□□ -1.1
PTPRM-202ENST00000400053 TMEM212A6NML5 194 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 BHLHE40O14503 412 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 ZDHHC11BP0C7U3 371 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 SERPINA2P20848 420 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 TEAD1P28347 426 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 HTR1FP30939 366 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 CLDN2P57739 230 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 MRPL58Q14197 206 aaKnown RBP8.18□□□□□ -1.1
PTPRM-202ENST00000400053 HSF5Q4G112 596 aaPredicted RBP8.18□□□□□ -1.1
PTPRM-202ENST00000400053 SLCO4C1Q6ZQN7 724 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 ZNF765Q7L2R6 523 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 MOB1BQ7L9L4 216 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 TCTN2Q96GX1 697 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 LRFN5Q96NI6 719 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 C20orf24Q9BUV8 137 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 OR11A1Q9GZK7 315 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 MCOLN1Q9GZU1 580 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 PARP12Q9H0J9 701 aaKnown RBP8.18□□□□□ -1.1
PTPRM-202ENST00000400053 UBQLN3Q9H347 655 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 PDFQ9HBH1 243 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 PLAC1Q9HBJ0 212 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 ASIC5Q9NY37 505 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 SLC25A37Q9NYZ2 338 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 TMEM184BQ9Y519 407 aaPredicted RBP8.18□□□□□ -1.1
PTPRM-202ENST00000400053 RP1P56715 2156 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 PRKRAO75569 313 aaKnown RBP8.18□□□□□ -1.1
PTPRM-202ENST00000400053 B3GALNT1O75752 331 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 AIFM1O95831 613 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 MGST1P10620 155 aaKnown RBP8.18□□□□□ -1.1
PTPRM-202ENST00000400053 HMGA1P17096 107 aaKnown RBP8.18□□□□□ -1.1
PTPRM-202ENST00000400053 DGCR2P98153 550 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 FOXK2Q01167 660 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 SLC36A2Q495M3 483 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 GRAMD2AQ8IUY3 354 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 CNEP1R1Q8N9A8 125 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 RELL2Q8NC24 303 aaPredicted RBP8.18□□□□□ -1.1
PTPRM-202ENST00000400053 OR52E1Q8NGJ3 308 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 RHBDD1Q8TEB9 315 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 TMEM255BQ8WV15 326 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 SLC6A18Q96N87 628 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 C1orf198Q9H425 327 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 SEMA4GQ9NTN9 838 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 CACFD1Q9UGQ2 172 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 MUTYHQ9UIF7 546 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 URGCP-MRPS24S4R325 110 aa8.18□□□□□ -1.1
PTPRM-202ENST00000400053 NSG1A0A0A6YYJ2 146 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 LRRC30A6NM36 301 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 CSF3P09919 207 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 RD3LP0DJH9 198 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 PVRP15151 417 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 EXOSC2Q13868 293 aaKnown RBP8.17□□□□□ -1.1
PTPRM-202ENST00000400053 NR0B2Q15466 257 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 Q499Y3 187 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 OR5M10Q6IEU7 315 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 TMEFF1Q8IYR6 380 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 DCLRE1CQ96SD1 692 aaKnown RBP8.17□□□□□ -1.1
PTPRM-202ENST00000400053 TMEM43Q9BTV4 400 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 ERVMER34-1Q9H9K5 563 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 ACER3Q9NUN7 267 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 ASB1Q9Y576 335 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 UBR3Q6ZT12 1888 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.17□□□□□ -1.1
PTPRM-202ENST00000400053 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.17□□□□□ -1.1
PTPRM-202ENST00000400053 SPINT2O43291 252 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 C1QAP02745 245 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 UBE2MP61081 183 aaKnown RBP8.17□□□□□ -1.1
PTPRM-202ENST00000400053 SNRPGP62308 76 aaKnown RBP8.17□□□□□ -1.1
PTPRM-202ENST00000400053 ESPNLQ6ZVH7 1005 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 NLRC3Q7RTR2 1065 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 PRICKLE2Q7Z3G6 844 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 SYT9Q86SS6 491 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 OR52H1Q8NGJ2 320 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 OR51S1Q8NGJ8 323 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 OR10Z1Q8NGY1 313 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 M1APQ8TC57 530 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 NXT1Q9UKK6 140 aaKnown RBP8.17□□□□□ -1.1
PTPRM-202ENST00000400053 NPFFR2Q9Y5X5 522 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 PRSS44E7EML9 344 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 LGALS8O00214 317 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 MAGEB4O15481 346 aaPredicted RBP8.17□□□□□ -1.1
PTPRM-202ENST00000400053 P2RX3P56373 397 aa8.17□□□□□ -1.1
PTPRM-202ENST00000400053 PRDX1Q06830 199 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms