RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 INTS12Q96CB8 462 aaKnown RBP7.7□□□□□ -1.18
SPTLC3-201ENST00000399002 SDSLQ96GA7 329 aa7.7□□□□□ -1.18
SPTLC3-201ENST00000399002 DCBLD2Q96PD2 775 aa7.7□□□□□ -1.18
SPTLC3-201ENST00000399002 NIPSNAP3BQ9BS92 247 aa7.7□□□□□ -1.18
SPTLC3-201ENST00000399002 QRSL1Q9H0R6 528 aaKnown RBP7.7□□□□□ -1.18
SPTLC3-201ENST00000399002 CHST8Q9H2A9 424 aa7.7□□□□□ -1.18
SPTLC3-201ENST00000399002 PATZ1Q9HBE1 687 aaKnown RBP7.7□□□□□ -1.18
SPTLC3-201ENST00000399002 PCDHGA5Q9Y5G8 931 aa7.7□□□□□ -1.18
SPTLC3-201ENST00000399002 A0A0B4J2A0 478 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 LGALS8O00214 317 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 EIF4EP06730 217 aaKnown RBP7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 SMIM18P0DKX4 95 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 TGM1P22735 817 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 GABRA2P47869 451 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 SUMO3P55854 103 aaPredicted RBP7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 RAC1P63000 192 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 DEFB103AP81534 67 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 COX20Q5RI15 118 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 HIST2H3PS2Q5TEC6 136 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 FAM122BQ7Z309 247 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 TMEM200AQ86VY9 491 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 SLC35G3Q8N808 338 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 ZNF485Q8NCK3 441 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 NT5CQ8TCD5 201 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 TMEM106AQ96A25 262 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 GNPNAT1Q96EK6 184 aaPredicted RBP7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 ZNF416Q9BWM5 594 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 OR11A1Q9GZK7 315 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 ACKR4Q9NPB9 350 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 OR14J1Q9UGF5 321 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 SHPKQ9UHJ6 478 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 TCRBV5S2A0A599 114 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 ZAR1LA6NP61 321 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 PIP5K1CO60331 668 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 IGLV3-27P01718 113 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 MBP02144 154 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 ABOP16442 354 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 SSTR2P30874 369 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 AKR1C1Q04828 323 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 SLC10A1Q14973 349 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 BAK1Q16611 211 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 SMN1Q16637 294 aaKnown RBP7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 ESPNLQ6ZVH7 1005 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 C1orf87Q8N0U7 546 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 ST8SIA1Q92185 356 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 EGLN2Q96KS0 407 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 LINC00615Q96LM1 132 aaPredicted RBP7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 NMNAT3Q96T66 252 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 TMEM43Q9BTV4 400 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 RNF32Q9H0A6 362 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 PDFQ9HBH1 243 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 HAO2Q9NYQ3 351 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 RFXAPO00287 272 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 P2RY10O00398 339 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 SDHAP31040 664 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 LEXMQ3ZCV2 418 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 NIPSNAP1Q9BPW8 284 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 CMC2Q9NRP2 79 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 PIGLQ9Y2B2 252 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 RPS10-NUDT3A0A1W2PQS6 291 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 ACOD1A6NK06 481 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 SOCS6O14544 535 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 SIGLEC6O43699 453 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 GLULP15104 373 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 MAGEB1P43366 347 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 RPS10P46783 165 aaKnown RBP7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 ZNF85Q03923 595 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 GAB1Q13480 694 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 TMEM41BQ5BJD5 291 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 TBPL2Q6SJ96 375 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 MAML2Q8IZL2 1156 aaPredicted RBP7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 UBQLN3Q9H347 655 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 C12orf10Q9HB07 376 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 AGPAT2O15120 278 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 HEXAP06865 529 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 CST9LP1Q5W188 147 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 CISD2Q8N5K1 135 aaKnown RBP7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 KDF1Q8NAX2 398 aaPredicted RBP7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 MITD1Q8WV92 249 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 OIT3Q8WWZ8 545 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 PDXPQ96GD0 296 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 ZNF75AQ96N20 296 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 MED20Q9H944 212 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 DECR2Q9NUI1 292 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 CHRNA9Q9UGM1 479 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 B3GALT5Q9Y2C3 310 aa7.69□□□□□ -1.18
SPTLC3-201ENST00000399002 BTAF1O14981 1849 aa7.68□□□□□ -1.18
SPTLC3-201ENST00000399002 NHSL1Q5SYE7 1610 aa7.68□□□□□ -1.18
SPTLC3-201ENST00000399002 A0A0U1RQK1 487 aa7.68□□□□□ -1.18
SPTLC3-201ENST00000399002 XRCC2O43543 280 aa7.68□□□□□ -1.18
SPTLC3-201ENST00000399002 VEGFBP49765 207 aa7.68□□□□□ -1.18
SPTLC3-201ENST00000399002 EBPQ15125 230 aaKnown RBP7.68□□□□□ -1.18
SPTLC3-201ENST00000399002 AGBL4Q5VU57 503 aa7.68□□□□□ -1.18
SPTLC3-201ENST00000399002 LCN10Q6JVE6 187 aa7.68□□□□□ -1.18
SPTLC3-201ENST00000399002 MS4A6EQ96DS6 147 aa7.68□□□□□ -1.18
SPTLC3-201ENST00000399002 MVB12AQ96EY5 273 aa7.68□□□□□ -1.18
SPTLC3-201ENST00000399002 OR6C1Q96RD1 312 aa7.68□□□□□ -1.18
SPTLC3-201ENST00000399002 SEC22CQ9BRL7 303 aa7.68□□□□□ -1.18
SPTLC3-201ENST00000399002 NAA50Q9GZZ1 169 aaKnown RBP7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms