RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ADAMTS14Q8WXS8 1223 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 CPPED1Q9BRF8 314 aaPredicted RBP13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 CRLF2Q9HC73 371 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 A6NHS1 94 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 FZD7O75084 574 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 SLC35E2P0CK97 266 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 HTR2CP28335 458 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 CSNK1G2P78368 415 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 RNF113BQ8IZP6 322 aaKnown RBP13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 OR6V1Q8N148 313 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 FGGYQ96C11 551 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 RBMXL1Q96E39 390 aaKnown RBP13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 TPPP3Q9BW30 176 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 LIN7BQ9HAP6 207 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 TUBG2Q9NRH3 451 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 CLEC1BQ9P126 229 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 GIPRP48546 466 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 SORDQ00796 357 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 MLLT11Q13015 90 aaPredicted RBP13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 ZNF468Q5VIY5 522 aaPredicted RBP13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 LYPD4Q6UWN0 246 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 C11orf40Q8WZ69 217 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 RNF32Q9H0A6 362 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 WDR76Q9H967 626 aa13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 CNOT2Q9NZN8 540 aaKnown RBP13.07□□□□□ -0.32
PCDHA11-201ENST00000398640 LILRA5A6NI73 299 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 TMEM212A6NML5 194 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 C1orf196B1AJZ1 125 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 IDSB3KWA1 339 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 RPL35P42766 123 aaKnown RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 NXPH1P58417 271 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 SYT9Q86SS6 491 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 SLC7A5P1Q8MH63 180 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 FAM185AQ8N0U4 392 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 OR2I1PQ8NGU4 316 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 GIMAP1Q8WWP7 306 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 UTP4Q969X6 686 aaKnown RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 FSCN3Q9NQT6 498 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 QPCTLQ9NXS2 382 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 PIGLQ9Y2B2 252 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 IGHV3-15A0A0B4J1V0 119 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 LGALS8O00214 317 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 HS3ST1O14792 307 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 MSTNO14793 375 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 TAPBPO15533 448 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 PMP2P02689 132 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 BCKDHBP21953 392 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 MRPS10P82664 201 aaKnown RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 OR8G1Q15617 311 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 PFN4Q8NHR9 129 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 EMG1Q92979 244 aaKnown RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 ANKRD9Q96BM1 317 aaPredicted RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 NAA50Q9GZZ1 169 aaKnown RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 SLC17A4Q9Y2C5 497 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 A0A096LPE4 126 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 A0A1W2PPZ6 126 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 POM121CA8CG34 1229 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 MED6O75586 246 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 SLC2A1P11166 492 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 GABRB3P28472 473 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 MRPS34P82930 218 aaKnown RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 GLYR1Q49A26 553 aaPredicted RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 OVCH1Q7RTY7 1134 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 TMPRSS7Q7RTY8 843 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 LILRA2Q8N149 483 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 OR56B1Q8NGI3 324 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 PRAF2O60831 178 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 CLDN1O95832 211 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 SNRNP70P08621 437 aaKnown RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 ANXA7P20073 488 aaKnown RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 FAPQ12884 760 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 HABP2Q14520 560 aaPredicted RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 GGTA1PQ4G0N0 100 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 AARDQ4LEZ3 155 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 ANKRD16Q6P6B7 361 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 LRRC28Q86X40 367 aaPredicted RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 ZNF419Q96HQ0 510 aaPredicted RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 ZNF701M0R085 212 aaPredicted RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 SELENOFO60613 162 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 ATPAF1Q5TC12 328 aaPredicted RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 PGAP1Q75T13 922 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 GDF7Q7Z4P5 450 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 CPEB3Q8NE35 698 aaKnown RBP13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 PPA2Q9H2U2 334 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 NARFLQ9H6Q4 476 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 B3GAT1Q9P2W7 334 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 PPT2Q9UMR5 302 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 CEPT1Q9Y6K0 416 aa13.06□□□□□ -0.32
PCDHA11-201ENST00000398640 TCRBV3S1A0A5B6 114 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 ZNF732B4DXR9 585 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 Q6ZTK2 550 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 PARP16Q8N5Y8 322 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 GHSRQ92847 366 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 BSCL2Q96G97 398 aaPredicted RBP13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 ZNF582Q96NG8 517 aaPredicted RBP13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 ZMAT3Q9HA38 289 aaKnown RBP13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 CPNE5Q9HCH3 593 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 FAM96BQ9Y3D0 163 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 SMCHD1A6NHR9 2005 aa13.05□□□□□ -0.32
PCDHA11-201ENST00000398640 FIGNL2A6NMB9 653 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms