RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 STK35Q8TDR2 534 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 AP3S1Q92572 193 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 ABTB1Q969K4 478 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-207ENST00000397200 RASD2Q96D21 266 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 KTI12Q96EK9 354 aaPredicted RBP13.33□□□□□ -0.28
CAPN3-207ENST00000397200 TBX5Q99593 518 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 TMED9Q9BVK6 235 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 OR11A1Q9GZK7 315 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 MIXL1Q9H2W2 232 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 CMAHPQ9Y471 501 aa13.33□□□□□ -0.28
CAPN3-207ENST00000397200 TLN1Q9Y490 2541 aaKnown RBP13.32□□□□□ -0.28
CAPN3-207ENST00000397200 TRAV36DV7A0A075B6V5 113 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 SHISA3A0PJX4 238 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 FUOMA2VDF0 154 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 CFL1P23528 166 aaKnown RBP13.32□□□□□ -0.28
CAPN3-207ENST00000397200 SDHAP31040 664 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 SLC16A1P53985 500 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 ACTA2P62736 377 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 ERVK-25P63136 954 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 ACTG2P63267 376 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 HSF2Q03933 536 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 MXD1Q05195 221 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 DBPQ10586 325 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-207ENST00000397200 TMEM176BQ3YBM2 270 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-207ENST00000397200 CDONQ4KMG0 1287 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 ALG10Q5BKT4 473 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 LINC01590Q5TEZ4 76 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 C1orf140Q5VVS0 124 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 DMKNQ6E0U4 476 aaPredicted RBP13.32□□□□□ -0.28
CAPN3-207ENST00000397200 SSX6Q7RTT6 188 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 ZPLD1Q8TCW7 415 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 TAAR8Q969N4 342 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 C4orf36Q96KX1 117 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 PGLYRP3Q96LB9 341 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 NMNAT3Q96T66 252 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 PTDSS2Q9BVG9 487 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 NDEL1Q9GZM8 345 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 KCNN2Q9H2S1 579 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 ST6GALNAC2Q9UJ37 374 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 ZNF407Q9C0G0 2248 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 MED12Q93074 2177 aa13.32□□□□□ -0.28
CAPN3-207ENST00000397200 TEX13CA0A0J9YWL9 993 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 E9PI62 339 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 GLCEO94923 617 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 AHSA1O95433 338 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 ACTL6AO96019 429 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 MT-ATP6P00846 226 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 OPN1LWP04000 364 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 CD1AP06126 327 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 TGM4P49221 684 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 MTNR1BP49286 362 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 STARP49675 285 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 BCAP31P51572 246 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 PSMD7P51665 324 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 RPL18Q07020 188 aaKnown RBP13.31□□□□□ -0.28
CAPN3-207ENST00000397200 NANOGNBQ7Z5D8 188 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 SLC35F2Q8IXU6 374 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 RFLNBQ8N5W9 214 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 RPS4Y2Q8TD47 263 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 ZNRF4Q8WWF5 429 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 RELTQ969Z4 430 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 ZMYND19Q96E35 227 aaPredicted RBP13.31□□□□□ -0.28
CAPN3-207ENST00000397200 CEP19Q96LK0 163 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 Q96M85 177 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 OR5B2Q96R09 309 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 HDHD5Q9BXW7 423 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 POTEKPQ9BYX7 375 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 ABCB10Q9NRK6 738 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 BSNQ9UPA5 3926 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 DNAJC13O75165 2243 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 CACNA1BQ00975 2339 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 OGG1O15527 345 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 SEC14L5O43304 696 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 PTTG1O95997 202 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 SHC1P29353 583 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 CDKN2AP42771 156 aaKnown RBP13.31□□□□□ -0.28
CAPN3-207ENST00000397200 RPS5P46782 204 aaKnown RBP13.31□□□□□ -0.28
CAPN3-207ENST00000397200 OR12D2P58182 307 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 PON3Q15166 354 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 ZNF79Q15937 498 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 GPR139Q6DWJ6 353 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 ZNF554Q86TJ5 538 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 C10orf53Q8N6V4 93 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 LSM14AQ8ND56 463 aaKnown RBP13.31□□□□□ -0.28
CAPN3-207ENST00000397200 OR6S1Q8NH40 331 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 SNRNP40Q96DI7 357 aaKnown RBP13.31□□□□□ -0.28
CAPN3-207ENST00000397200 DNAJA3Q96EY1 480 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 ARL5BQ96KC2 179 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 KLHL15Q96M94 604 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 GPR137Q96N19 417 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 PLSCR2Q9NRY7 297 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 MOKQ9UQ07 419 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 HDGFL3Q9Y3E1 203 aa13.31□□□□□ -0.28
CAPN3-207ENST00000397200 A0A1B0GVC2 190 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 CD8B2A6NJW9 211 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 TTLL8A6PVC2 850 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 BLOC1S5-TXNDC5H3BN57 136 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 AQP7O14520 342 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 CASKO14936 926 aa13.3□□□□□ -0.28
CAPN3-207ENST00000397200 OR2T1O43869 369 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms