RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 LOXL2Q9Y4K0 774 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 NSG1A0A0A6YYJ2 146 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 EFNA2O43921 213 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 TMEM127O75204 238 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 TCEA1P23193 301 aaKnown RBP13.42□□□□□ -0.26
CBX3-202ENST00000396386 TPTEP56180 551 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 SELENBP1Q13228 472 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 CARTPTQ16568 116 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 MEP1BQ16820 701 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 PYHIN1Q6K0P9 492 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 FDX2Q6P4F2 183 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 LRRN1Q6UXK5 716 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 DBX2Q6ZNG2 339 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 DND1Q8IYX4 353 aaKnown RBP13.42□□□□□ -0.26
CBX3-202ENST00000396386 ZNF454Q8N9F8 522 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 OR11G2Q8NGC1 345 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 OR5H6Q8NGV6 325 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 SLC25A43Q8WUT9 341 aaPredicted RBP13.42□□□□□ -0.26
CBX3-202ENST00000396386 KCNK17Q96T54 332 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 WACQ9BTA9 647 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 LRFN3Q9BTN0 628 aa13.42□□□□□ -0.26
CBX3-202ENST00000396386 A0A087WV48 116 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 A0A1W2PQ72 361 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 CD63P08962 238 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 EIF1P41567 113 aaKnown RBP13.41□□□□□ -0.26
CBX3-202ENST00000396386 SSR4P51571 173 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 ROM1Q03395 351 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 EIF2B1Q14232 305 aaKnown RBP13.41□□□□□ -0.26
CBX3-202ENST00000396386 SLC17A1Q14916 467 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 SF3A2Q15428 464 aaKnown RBP13.41□□□□□ -0.26
CBX3-202ENST00000396386 INPP5JQ15735 1006 aaPredicted RBP13.41□□□□□ -0.26
CBX3-202ENST00000396386 ETFDHQ16134 617 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 ZNF544Q6NX49 715 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 KCTD18Q6PI47 426 aaPredicted RBP13.41□□□□□ -0.26
CBX3-202ENST00000396386 BAIAP2L2Q6UXY1 529 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 NDUFAF7Q7L592 441 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 UBQLNLQ8IYU4 475 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 ZNF679Q8IYX0 411 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 WDSUB1Q8N9V3 476 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 ZNF671Q8TAW3 534 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 LGALS14Q8TCE9 139 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 THRSPQ92748 146 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 RFT1Q96AA3 541 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 ZBTB8AQ96BR9 441 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 ZC3HAV1LQ96H79 300 aaKnown RBP13.41□□□□□ -0.26
CBX3-202ENST00000396386 LOXL4Q96JB6 756 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 FRMD6Q96NE9 622 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 DCBLD2Q96PD2 775 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 STRADBQ9C0K7 418 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 HDHD2Q9H0R4 259 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 ELOVL3Q9HB03 270 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 ZNF160Q9HCG1 818 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 SACM1LQ9NTJ5 587 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 SPATA2Q9UM82 520 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 COA3Q9Y2R0 106 aaPredicted RBP13.41□□□□□ -0.26
CBX3-202ENST00000396386 PCDHGA5Q9Y5G8 931 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 KIF26BQ2KJY2 2108 aa13.41□□□□□ -0.26
CBX3-202ENST00000396386 A0A087WZY1 265 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 A0A0B4J203 849 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 AIPO00170 330 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 LYRM1O43325 122 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 STK17BO94768 372 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 ADH6P28332 368 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 NR4A2P43354 598 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 KIR3DL2P43630 455 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 UBE2NLQ5JXB2 153 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 OTPQ5XKR4 325 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 ZNF57Q68EA5 555 aaPredicted RBP13.4□□□□□ -0.26
CBX3-202ENST00000396386 KRT77Q7Z794 578 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 RDH10Q8IZV5 341 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 PRSS35Q8N3Z0 413 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 SLC26A10Q8NG04 563 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 OR52N5Q8NH56 324 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 GPR148Q8TDV2 347 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 RNF128Q8TEB7 428 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 ORAI1Q96D31 301 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 GFI1Q99684 422 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 MMP28Q9H239 520 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 TCF7L1Q9HCS4 588 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 RBFOX1Q9NWB1 397 aaKnown RBP13.4□□□□□ -0.26
CBX3-202ENST00000396386 MED29Q9NX70 200 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 A0A1B0GTH9 108 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 LNP1A1A4G5 178 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 IFITM5A6NNB3 132 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 TFECO14948 347 aaPredicted RBP13.4□□□□□ -0.26
CBX3-202ENST00000396386 KHDRBS3O75525 346 aaKnown RBP13.4□□□□□ -0.26
CBX3-202ENST00000396386 PTGS2P35354 604 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 MAGEB1P43366 347 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 SOX2P48431 317 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 RIDAP52758 137 aaKnown RBP13.4□□□□□ -0.26
CBX3-202ENST00000396386 FMODQ06828 376 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 ANGPT1Q15389 498 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 WDR38Q5JTN6 314 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 PLCZ1Q86YW0 608 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 ZNF433Q8N7K0 673 aaPredicted RBP13.4□□□□□ -0.26
CBX3-202ENST00000396386 ADAMTS14Q8WXS8 1223 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 TRIM63Q969Q1 353 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 CMTM3Q96MX0 182 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 OR5B2Q96R09 309 aa13.4□□□□□ -0.26
CBX3-202ENST00000396386 CDCP1Q9H5V8 836 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms