RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 PGGHGQ32M88 737 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 DEFB134Q4QY38 66 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TRMT12Q53H54 448 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 TMEM255AQ5JRV8 349 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 IDNKQ5T6J7 187 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 ZNF660Q6AZW8 331 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 MTFR2Q6P444 385 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 WDR88Q6ZMY6 472 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 ZNF574Q6ZN55 896 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 TMUB2Q71RG4 321 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 OVCH1Q7RTY7 1134 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 SYS1Q8N2H4 156 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 OR2C3Q8N628 320 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 BCORP1Q8N888 145 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 ZFP41Q8N8Y5 198 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 OR5AK3PQ8NH89 298 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 OR1L3Q8NH93 324 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 PPP1R14AQ96A00 147 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 COL26A1Q96A83 441 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 RNFT2Q96EX2 444 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 ZNF845Q96IR2 970 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 HSPA12BQ96MM6 686 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TIMP4Q99727 224 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 ZNF251Q9BRH9 671 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TMED9Q9BVK6 235 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 OR10A5Q9H207 317 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 SLC25A32Q9H2D1 315 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 UBQLN4Q9NRR5 601 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TVP23BQ9NYZ1 205 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 MGAT4CQ9UBM8 478 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 FBXW2Q9UKT8 454 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 CA14Q9ULX7 337 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TDRD6O60522 2096 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 A0A0G2JK05 382 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 PMS2P1A4D2B8 440 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 OR2W5A6NFC9 320 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 H3BN98 237 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 CTDSPLO15194 276 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 ITGA10O75578 1167 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 EIF3GO75821 320 aaKnown RBP eCLIP4.86□□□□□ -1.63
VPS41-203ENST00000395969 UBL3O95164 117 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 RCBTB2O95199 551 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 HIST1H2ABP04908 130 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 ZGLP1P0C6A0 271 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 MAPK3P27361 379 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 ADH6P28332 368 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 SOAT1P35610 550 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 RNF144AP50876 292 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 MECP2P51608 486 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 SEC61A1P61619 476 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 SIM1P81133 766 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 ALKBH1Q13686 389 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 EBPQ15125 230 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 ZNHIT3Q15649 155 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 AMZ1Q400G9 498 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 METTL11BQ5VVY1 283 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 ACSM5Q6NUN0 579 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TNFAIP8L2Q6P589 184 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 B3GLCTQ6Y288 498 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 DPY19L2P2Q6ZN68 376 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 DGAT2L6Q6ZPD8 337 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 RHOUQ7L0Q8 258 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 HIST3H2AQ7L7L0 130 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 FAM122BQ7Z309 247 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 IQCF1Q8N6M8 205 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 POMGNT2Q8NAT1 580 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 OR52R1Q8NGF1 315 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 OR5D16Q8NGK9 328 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 M1APQ8TC57 530 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 LMX1AQ8TE12 382 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 SFT2D1Q8WV19 159 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 KAT2AQ92830 837 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 HIST1H2ACQ93077 130 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 LIN37Q96GY3 246 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 DGAT2Q96PD7 388 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 GPA33Q99795 319 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 UTP23Q9BRU9 249 aaKnown RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 SPRTNQ9H040 489 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 LRRN3Q9H3W5 708 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 CHMP1AQ9HD42 196 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 Q9N2J8 555 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 CA10Q9NS85 328 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 LRIT1Q9P2V4 623 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 LAMP5Q9UJQ1 280 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 FBXL3Q9UKT7 428 aa4.86□□□□□ -1.63
VPS41-203ENST00000395969 TMEM184BQ9Y519 407 aaPredicted RBP4.86□□□□□ -1.63
VPS41-203ENST00000395969 ARHGEF17Q96PE2 2063 aaPredicted RBP4.85□□□□□ -1.63
VPS41-203ENST00000395969 FER1L5A0AVI2 2057 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 A0A1W2PNV4 684 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 ZNF860A6NHJ4 632 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 CD8B2A6NJW9 211 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 DVL2O14641 736 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 GNB5O14775 395 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 RGS9O75916 674 aaPredicted RBP4.85□□□□□ -1.63
VPS41-203ENST00000395969 CD8BP10966 210 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 GRK6P43250 576 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 MTNR1AP48039 350 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 EFNA3P52797 238 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 SLC26A5P58743 744 aa4.85□□□□□ -1.63
VPS41-203ENST00000395969 SSTP61278 116 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms