RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 HIST3H3Q16695 136 aa18.12■□□□□ 0.49
VCPKMT-202ENST00000395860 SYT6Q5T7P8 510 aaPredicted RBP18.12■□□□□ 0.49
VCPKMT-202ENST00000395860 ZNF367Q7RTV3 350 aa18.12■□□□□ 0.49
VCPKMT-202ENST00000395860 SLC16A9Q7RTY1 509 aa18.12■□□□□ 0.49
VCPKMT-202ENST00000395860 OR2T27Q8NH04 317 aa18.12■□□□□ 0.49
VCPKMT-202ENST00000395860 TMEM54Q969K7 222 aa18.12■□□□□ 0.49
VCPKMT-202ENST00000395860 MCHR2Q969V1 340 aa18.12■□□□□ 0.49
VCPKMT-202ENST00000395860 NMD3Q96D46 503 aaKnown RBP18.12■□□□□ 0.49
VCPKMT-202ENST00000395860 OR5M11Q96RB7 305 aa18.12■□□□□ 0.49
VCPKMT-202ENST00000395860 INTS14Q96SY0 518 aa18.12■□□□□ 0.49
VCPKMT-202ENST00000395860 GLTPQ9NZD2 209 aa18.12■□□□□ 0.49
VCPKMT-202ENST00000395860 ZNF175Q9Y473 711 aa18.12■□□□□ 0.49
VCPKMT-202ENST00000395860 TMEM129A0AVI4 362 aa18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 QDPRP09417 244 aa18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 FCGR2AP12318 317 aa18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 HCCSP53701 268 aa18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 GP2P55259 537 aaKnown RBP18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 KRTCAP3Q53RY4 240 aa18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 TIGD4Q8IY51 512 aa18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 KLHL36Q8N4N3 616 aa18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 TEX19Q8NA77 164 aa18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 OR5M9Q8NGP3 310 aa18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 OR6N2Q8NGY6 317 aa18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 TMEM45BQ96B21 275 aa18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 INTS12Q96CB8 462 aaKnown RBP18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 MARCH7Q9H992 704 aa18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 NOSIPQ9Y314 301 aaKnown RBP18.11■□□□□ 0.49
VCPKMT-202ENST00000395860 A0A1W2PQL4 384 aaPredicted RBP18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 SLC43A1O75387 559 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 SEC14L2O76054 403 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 TTKP33981 857 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 WNT4P56705 351 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 OR2G6Q5TZ20 316 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 SLC25A47Q6Q0C1 308 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 P4HA3Q7Z4N8 544 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 TUSC5Q8IXB3 177 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 CISD2Q8N5K1 135 aaKnown RBP18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 OR13F1Q8NGS4 319 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 ZNF649Q9BS31 505 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 ALG8Q9BVK2 526 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 WDR76Q9H967 626 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 RNF122Q9H9V4 155 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 BCO1Q9HAY6 547 aa18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 LSM2Q9Y333 95 aaKnown RBP18.1■□□□□ 0.49
VCPKMT-202ENST00000395860 TGM6O95932 706 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 HSMCR30P0CW71 290 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 NTF4P34130 210 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 PTGS2P35354 604 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 ZNF85Q03923 595 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 GALEQ14376 348 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 SPHARQ15513 63 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 TIGD6Q17RP2 521 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 LRFN4Q6PJG9 635 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 GLB1L2Q8IW92 636 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 C20orf196Q8IYI0 205 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 TRIB1Q96RU8 372 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 CALHM2Q9HA72 323 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 MRPL22Q9NWU5 206 aaKnown RBP18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 FOXD3Q9UJU5 478 aaPredicted RBP18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 CLEC4AQ9UMR7 237 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 SMIM31A0A1B0GVY4 71 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 A0A1W2PPL8 197 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 ZNF724A8MTY0 619 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 MRPL33O75394 65 aaKnown RBP18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 ADAM8P78325 824 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 HSF2Q03933 536 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 PHYHD1Q5SRE7 291 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 ZNF324BQ6AW86 544 aaPredicted RBP18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 TMPRSS11AQ6ZMR5 421 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 SLC26A10Q8NG04 563 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 GATAD2BQ8WXI9 593 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 COG8Q96MW5 612 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 YIPF3Q9GZM5 350 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 NDUFA13Q9P0J0 144 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 CLCF1Q9UBD9 225 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 CAB39Q9Y376 341 aaPredicted RBP18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 CACNA1GO43497 2377 aa18.09■□□□□ 0.49
VCPKMT-202ENST00000395860 ZNF670-ZNF695F2Z2N8 137 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 MPZL1O95297 269 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 YES1P07947 543 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 ZNF823P16415 610 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 LAP3P28838 519 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 CD79BP40259 229 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 MEP1BQ16820 701 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 ADGRE4PQ86SQ3 457 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 CDC20BQ86Y33 519 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 RFLNBQ8N5W9 214 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 OR52N1Q8NH53 320 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 MGLLQ99685 303 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 TTTY10Q9BZA0 68 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 ULBP2Q9BZM5 246 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 PARPBPQ9NWS1 579 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 COPS3Q9UNS2 423 aa18.08■□□□□ 0.48
VCPKMT-202ENST00000395860 AHRRA9YTQ3 701 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 ZNF593O00488 134 aaPredicted RBP18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 GAAP10253 952 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 ENTPD1P49961 510 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 ARMCX4Q5H9R4 360 aa18.07■□□□□ 0.48
VCPKMT-202ENST00000395860 C10orf128Q5T292 105 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms