RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 HIST1H2ABP04908 130 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 VIMP08670 466 aaKnown RBP13.87□□□□□ -0.19
CXCL12-206ENST00000395795 UMPSP11172 480 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 APEHP13798 732 aaKnown RBP13.87□□□□□ -0.19
CXCL12-206ENST00000395795 ACADSP16219 412 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 ZNF26P17031 533 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-206ENST00000395795 MAKP20794 623 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 ALDH3B1P43353 468 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 ERVS71-1P61550 626 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 FMODQ06828 376 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 LRRC23Q53EV4 343 aaPredicted RBP13.87□□□□□ -0.19
CXCL12-206ENST00000395795 HSP90B2PQ58FF3 399 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 SLC25A47Q6Q0C1 308 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 HIST3H2AQ7L7L0 130 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 MEX3DQ86XN8 651 aaKnown RBP13.87□□□□□ -0.19
CXCL12-206ENST00000395795 PHC2Q8IXK0 858 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 CLDN22Q8N7P3 220 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 CPEB3Q8NE35 698 aaKnown RBP13.87□□□□□ -0.19
CXCL12-206ENST00000395795 UBASH3BQ8TF42 649 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 HIST1H2ACQ93077 130 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 PRRC1Q96M27 445 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 INIPQ9NRY2 104 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 REV1Q9UBZ9 1251 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 FZR1Q9UM11 496 aa13.87□□□□□ -0.19
CXCL12-206ENST00000395795 STAB1Q9NY15 2570 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 MXRA5Q9NR99 2828 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 IGLV3-9A0A075B6K5 115 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 CLPTM1O96005 669 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 COL8A2P25067 703 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 CDAP32320 146 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 PODNL1Q6PEZ8 512 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 PCYOX1LQ8NBM8 494 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 SLC30A7Q8NEW0 376 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 RP9Q8TA86 221 aaKnown RBP13.86□□□□□ -0.19
CXCL12-206ENST00000395795 YIPF5Q969M3 257 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 TSPAN32Q96QS1 320 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 RACGAP1Q9H0H5 632 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 DYNLRB1Q9NP97 96 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 GID8Q9NWU2 228 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 SLC7A8Q9UHI5 535 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 FBXL3Q9UKT7 428 aa13.86□□□□□ -0.19
CXCL12-206ENST00000395795 LOC100289279A0A1B0GTE1 492 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 A0A1W2PRG6 482 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 VSTM5A8MXK1 200 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 M0R233 179 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 WNT9BO14905 357 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 RP2O75695 350 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 SNAP29O95721 258 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 IFNA14P01570 189 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 IGHMP01871 453 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 COX4I1P13073 169 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 ZNF250P15622 560 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 TCN1P20061 433 aaPredicted RBP13.85□□□□□ -0.19
CXCL12-206ENST00000395795 MDH1P40925 334 aaKnown RBP13.85□□□□□ -0.19
CXCL12-206ENST00000395795 YAP1P46937 504 aaKnown RBP13.85□□□□□ -0.19
CXCL12-206ENST00000395795 CLRN1P58418 232 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 MRPS34P82930 218 aaKnown RBP13.85□□□□□ -0.19
CXCL12-206ENST00000395795 LIPEQ05469 1076 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 FAM120AOSQ5T036 256 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 FOXL2NBQ6ZUU3 175 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 IL17RELQ6ZVW7 336 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 OFCC1Q8IZS5 231 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 ZNF519Q8TB69 540 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 TPD52L3Q96J77 140 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 TXNIPQ9H3M7 391 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 SMURF2Q9HAU4 748 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 MED4Q9NPJ6 270 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 RHCGQ9UBD6 479 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 MED31Q9Y3C7 131 aa13.85□□□□□ -0.19
CXCL12-206ENST00000395795 FAM157BP0CG42 384 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 DAP3P51398 398 aaKnown RBP13.84□□□□□ -0.19
CXCL12-206ENST00000395795 SLC7A2P52569 658 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 PRKCDQ05655 676 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 ST3GAL3Q11203 375 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 IQCCQ4KMZ1 466 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 FAM166AQ6J272 317 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 CBLL1Q75N03 491 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 SLC16A14Q7RTX9 510 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 DPPA2Q7Z7J5 298 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 NRMQ8IXM6 262 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 ZNF540Q8NDQ6 660 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 GTF3AQ92664 365 aaKnown RBP13.84□□□□□ -0.19
CXCL12-206ENST00000395795 BPIFA2Q96DR5 249 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 MYLK2Q9H1R3 596 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 SIAEQ9HAT2 523 aa13.84□□□□□ -0.19
CXCL12-206ENST00000395795 LOC100509620A0A075B734 347 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 A0A087WUU8 490 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 CXCR6O00574 342 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 CDC42EP2O14613 210 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 PHF1O43189 567 aaPredicted RBP13.83□□□□□ -0.2
CXCL12-206ENST00000395795 TGFAP01135 160 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 SCG5P05408 212 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 NAT2P11245 290 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 IFI30P13284 250 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 APEX1P27695 318 aaKnown RBP13.83□□□□□ -0.2
CXCL12-206ENST00000395795 THBS2P35442 1172 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 WNT5AP41221 380 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 GSK3BP49841 420 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 ALG10Q5BKT4 473 aa13.83□□□□□ -0.2
CXCL12-206ENST00000395795 TBPL2Q6SJ96 375 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms