RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 HTRA1Q92743 480 aa14.46□□□□□ -0.09
CXCL1-201ENST00000395761 EME1Q96AY2 570 aa14.46□□□□□ -0.09
CXCL1-201ENST00000395761 SAMD8Q96LT4 415 aa14.46□□□□□ -0.09
CXCL1-201ENST00000395761 RBM4BQ9BQ04 359 aaKnown RBP14.46□□□□□ -0.09
CXCL1-201ENST00000395761 TMEM204Q9BSN7 226 aa14.46□□□□□ -0.09
CXCL1-201ENST00000395761 RBM4Q9BWF3 364 aaKnown RBP14.46□□□□□ -0.09
CXCL1-201ENST00000395761 OR52D1Q9H346 318 aa14.46□□□□□ -0.09
CXCL1-201ENST00000395761 ESRP2Q9H6T0 727 aaKnown RBP14.46□□□□□ -0.09
CXCL1-201ENST00000395761 NRIP3Q9NQ35 241 aa14.46□□□□□ -0.09
CXCL1-201ENST00000395761 USE1Q9NZ43 259 aa14.46□□□□□ -0.09
CXCL1-201ENST00000395761 IER3IP1Q9Y5U9 82 aa14.46□□□□□ -0.09
CXCL1-201ENST00000395761 TEX15Q9BXT5 2789 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 ARPC4-TTLL3A0A0A6YYG9 625 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 TEX13CA0A0J9YWL9 993 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 A6NIZ1 184 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 M0R1B8 84 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 ARHGEF9O43307 516 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 SLC2A10O95528 541 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 WNT11O96014 354 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 GSTM3P21266 225 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 UBE2NP61088 152 aaKnown RBP14.45□□□□□ -0.1
CXCL1-201ENST00000395761 RAP1BP61224 184 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 RAP1AP62834 184 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 MESTQ5EB52 335 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 DPY19L2P2Q6ZN68 376 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 CBR4Q8N4T8 237 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 PACRGLQ8N7B6 248 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 GTPBP3Q969Y2 492 aaKnown RBP14.45□□□□□ -0.1
CXCL1-201ENST00000395761 RASD2Q96D21 266 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 GPX7Q96SL4 187 aaPredicted RBP14.45□□□□□ -0.1
CXCL1-201ENST00000395761 SLC29A1Q99808 456 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 FOXB1Q99853 325 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 NIPSNAP1Q9BPW8 284 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 ALG12Q9BV10 488 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 NDEL1Q9GZM8 345 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 EGLN3Q9H6Z9 239 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 ZNF556Q9HAH1 456 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 GRHPRQ9UBQ7 328 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 SPG11Q96JI7 2443 aa14.45□□□□□ -0.1
CXCL1-201ENST00000395761 SOCS2O14508 198 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 PPP1R3DO95685 299 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 ALPLP05186 524 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 CD3EP07766 207 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 IGFBP1P08833 259 aaPredicted RBP14.44□□□□□ -0.1
CXCL1-201ENST00000395761 HOXB1P14653 301 aaPredicted RBP14.44□□□□□ -0.1
CXCL1-201ENST00000395761 ALDH3A2P51648 485 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 ZNF133P52736 654 aaPredicted RBP14.44□□□□□ -0.1
CXCL1-201ENST00000395761 SPOCK1Q08629 439 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 CD47Q08722 323 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 DAG1Q14118 895 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 C10orf128Q5T292 105 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 FAM205BPQ63HN1 556 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 LPCAT4Q643R3 524 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 SLC25A47Q6Q0C1 308 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 KLHL17Q6TDP4 642 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 ZNF704Q6ZNC4 412 aaPredicted RBP14.44□□□□□ -0.1
CXCL1-201ENST00000395761 ZNF620Q6ZNG0 422 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 SKA3Q8IX90 412 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 ATG16L2Q8NAA4 619 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 LILRB1Q8NHL6 650 aaPredicted RBP14.44□□□□□ -0.1
CXCL1-201ENST00000395761 NRG4Q8WWG1 115 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 NSMAFQ92636 917 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 NEUROG1Q92886 237 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 ZNF570Q96NI8 536 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 SMURF2Q9HAU4 748 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 OBP2BQ9NPH6 170 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 TMEM38BQ9NVV0 291 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 NAV2Q8IVL1 2488 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 CSMD1Q96PZ7 3565 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 MAST4O15021 2626 aa14.44□□□□□ -0.1
CXCL1-201ENST00000395761 IMPA2O14732 288 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 HLA-HP01893 362 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 PATE4P0C8F1 98 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 PTAFRP25105 342 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 CD40P25942 277 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 PEX2P28328 305 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 SLC6A6P31641 620 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 CAPZA2P47755 286 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 PIGFQ07326 219 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 THEM4Q5T1C6 240 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 GPR139Q6DWJ6 353 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 RASSF6Q6ZTQ3 369 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 PARP8Q8N3A8 854 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 SLC22A24Q8N4F4 322 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 KBTBD8Q8NFY9 601 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 FGFBP3Q8TAT2 258 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 ERMAPQ96PL5 475 aaPredicted RBP14.43□□□□□ -0.1
CXCL1-201ENST00000395761 RBP7Q96R05 134 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 SH3GL3Q99963 347 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 IFT27Q9BW83 186 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 PLA2G12AQ9BZM1 189 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 UBTD1Q9HAC8 227 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 NOX3Q9HBY0 568 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 B3GNT2Q9NY97 397 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 ZNF224Q9NZL3 707 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 REV1Q9UBZ9 1251 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 TMEFF2Q9UIK5 374 aaPredicted RBP14.43□□□□□ -0.1
CXCL1-201ENST00000395761 RNF115Q9Y4L5 304 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 UGT2A1Q9Y4X1 527 aa14.43□□□□□ -0.1
CXCL1-201ENST00000395761 AKAP6Q13023 2319 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms