RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 NECAP2Q9NVZ3 263 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 TRGV8A0A0C4DH27 118 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 PMS2P1A4D2B8 440 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 CSO75390 466 aaKnown RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 SCAF4O95104 1147 aaKnown RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 CDONQ4KMG0 1287 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 SFXN4Q6P4A7 337 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 SLC22A25Q6T423 547 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 WFDC8Q8IUA0 241 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 FAM71CQ8NEG0 241 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 KCTD12Q96CX2 325 aaKnown RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 EMC6Q9BV81 110 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 CHRNA9Q9UGM1 479 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 OSGIN1Q9UJX0 560 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 DAPP1Q9UN19 280 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 SCG5P05408 212 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 ZNF133P52736 654 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 GNB2P62879 340 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 HBG1P69891 147 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 HBG2P69892 147 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 DPTQ07507 201 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 HABP2Q14520 560 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 YIF1BQ5BJH7 314 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 RNF170Q96K19 258 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 CHST11Q9NPF2 352 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 DSCR3O14972 297 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 SULT1B1O43704 296 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 OR8U8P0C7N1 319 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 HSF1Q00613 529 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 OGFOD3Q6PK18 319 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 CPEB2Q7Z5Q1 589 aaKnown RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 BCDIN3DQ7Z5W3 292 aaKnown RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 TXNL4BQ9NX01 149 aaKnown RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 ADAMTSL3P82987 1691 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 PLRG1O43660 514 aaKnown RBP9.53□□□□□ -0.88
COL4A6-203ENST00000394872 GDNFP39905 211 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 MTNR1BP49286 362 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 PPP2CBP62714 309 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 GNB1P62873 340 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 PPP2CAP67775 309 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 TATDN3Q17R31 274 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 SLC43A2Q8N370 569 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 SHARPINQ9H0F6 387 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 TAS2R16Q9NYV7 291 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 A0A0B4J2A0 478 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 SLC2A1P11166 492 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 TRIM23P36406 574 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 SRPXP78539 464 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 PLPP7Q8NBV4 271 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 CHST8Q9H2A9 424 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 GPR173Q9NS66 373 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 SHPKQ9UHJ6 478 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 PSORS1C1Q9UIG5 152 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 ACSM1Q08AH1 577 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 ARHGAP11BQ3KRB8 267 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 GLIPR1L1Q6UWM5 242 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 RETREG3Q86VR2 466 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 NKAIN3Q8N8D7 197 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 BAHD1Q8TBE0 780 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-203ENST00000394872 NIPSNAP1Q9BPW8 284 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 NDRG4Q9ULP0 352 aaKnown RBP9.53□□□□□ -0.88
COL4A6-203ENST00000394872 M0R082 166 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 SPRED3Q2MJR0 410 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 GLYATL3Q5SZD4 288 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 ZNF468Q5VIY5 522 aaPredicted RBP9.53□□□□□ -0.88
COL4A6-203ENST00000394872 NDRG3Q9UGV2 375 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 MUTYHQ9UIF7 546 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 RAB22AQ9UL26 194 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 LOC100289279A0A1B0GTE1 492 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 CTDSP2O14595 271 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 APOA2P02652 100 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 GLULP15104 373 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 GLB1P16278 677 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 SERPINF1P36955 418 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 NPBWR1P48145 328 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 GALEQ14376 348 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.53□□□□□ -0.88
COL4A6-203ENST00000394872 DPPA2Q7Z7J5 298 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 MORN4Q8NDC4 146 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 CCL4L1Q8NHW4 92 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 WBP2Q969T9 261 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 TUBG2Q9NRH3 451 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 UFSP2Q9NUQ7 469 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 GMPR2Q9P2T1 348 aaKnown RBP9.53□□□□□ -0.88
COL4A6-203ENST00000394872 DIMT1Q9UNQ2 313 aaKnown RBP9.53□□□□□ -0.88
COL4A6-203ENST00000394872 ETV7Q9Y603 341 aa9.53□□□□□ -0.88
COL4A6-203ENST00000394872 PLCH1Q4KWH8 1693 aa9.52□□□□□ -0.88
COL4A6-203ENST00000394872 A0A0D9SG52 128 aa9.52□□□□□ -0.88
COL4A6-203ENST00000394872 MKRN2OSH3BPM6 223 aa9.52□□□□□ -0.88
COL4A6-203ENST00000394872 QDPRP09417 244 aa9.52□□□□□ -0.88
COL4A6-203ENST00000394872 ADPRMQ3LIE5 342 aa9.52□□□□□ -0.88
COL4A6-203ENST00000394872 RFPL4BQ6ZWI9 263 aa9.52□□□□□ -0.88
COL4A6-203ENST00000394872 NAA40Q86UY6 237 aa9.52□□□□□ -0.88
COL4A6-203ENST00000394872 ENTHD1Q8IYW4 607 aa9.52□□□□□ -0.88
COL4A6-203ENST00000394872 EXD3Q8N9H8 876 aa9.52□□□□□ -0.88
COL4A6-203ENST00000394872 SARAFQ96BY9 339 aa9.52□□□□□ -0.88
COL4A6-203ENST00000394872 BSCL2Q96G97 398 aaPredicted RBP9.52□□□□□ -0.88
COL4A6-203ENST00000394872 Q96M85 177 aa9.52□□□□□ -0.88
COL4A6-203ENST00000394872 MED18Q9BUE0 208 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms