RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 COMMD4Q9H0A8 199 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 SEMA6CQ9H3T2 930 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 TMEM131Q92545 1883 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 GGT3PA6NGU5 568 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 C19orf67A6NJJ6 358 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 POM121CA8CG34 1229 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 ZNF432O94892 652 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 RLN1P04808 185 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 ALOX5APP20292 161 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 KIR3DL2P43630 455 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 PRTGQ2VWP7 1150 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 ZNF542PQ5EBM4 170 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 DCAF12L2Q5VW00 463 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 MCATQ8IVS2 390 aaKnown RBP16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 MUC20Q8N307 709 aaPredicted RBP16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 SDR16C5Q8N3Y7 309 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 OR2AK2Q8NG84 335 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 GPR148Q8TDV2 347 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 AMELYQ99218 206 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 KLHDC3Q9BQ90 382 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 KCNK15Q9H427 330 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 GRHPRQ9UBQ7 328 aa16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 MRPS17Q9Y2R5 130 aaKnown RBP16.61■□□□□ 0.25
PCDHA1-202ENST00000394633 TMEM212A6NML5 194 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 RP2O75695 350 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 CLPSP04118 112 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 CSF1P09603 554 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 PTGS2P35354 604 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 YPEL5P62699 121 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 SKP2Q13309 424 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 NKAIN2Q5VXU1 208 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 B3GNTL1Q67FW5 361 aaPredicted RBP16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 LRRC69Q6ZNQ3 347 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 SLC22A18ASQ8N1D0 253 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 OR13H1Q8NG92 308 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 PHOSPHO1Q8TCT1 267 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 SCARB1Q8WTV0 552 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 MCHR2Q969V1 340 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 KTI12Q96EK9 354 aaPredicted RBP16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 MRPS33Q9Y291 106 aaKnown RBP16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 ZDBF2Q9HCK1 2354 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 FXYD6-FXYD2A0A087WZ82 144 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 MEIS3P1A6NDR6 274 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 F5H5P2 479 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 GOSR2O14653 212 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 KDM4BO94953 1096 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 TNFP01375 233 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 LPLP06858 475 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 PROS1P07225 676 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 DCNP07585 359 aaKnown RBP16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 GABRA1P14867 456 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 PPP3CBP16298 524 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 EGR3Q06889 387 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 TUSC1Q2TAM9 212 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 TMEM81Q6P7N7 255 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 MED25Q71SY5 747 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 C19orf47Q8N9M1 422 aaKnown RBP16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 OR6N1Q8NGY5 312 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 FXYD6Q9H0Q3 95 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 TAS2R8Q9NYW2 309 aa16.6■□□□□ 0.25
PCDHA1-202ENST00000394633 BET1O15155 118 aa16.59■□□□□ 0.25
PCDHA1-202ENST00000394633 CALCRP30988 508 aa16.59■□□□□ 0.25
PCDHA1-202ENST00000394633 CSF2RBP32927 897 aa16.59■□□□□ 0.25
PCDHA1-202ENST00000394633 OR51S1Q8NGJ8 323 aa16.59■□□□□ 0.25
PCDHA1-202ENST00000394633 SHDQ96IW2 340 aa16.59■□□□□ 0.25
PCDHA1-202ENST00000394633 C4orf45Q96LM5 186 aa16.59■□□□□ 0.25
PCDHA1-202ENST00000394633 ELF4Q99607 663 aaPredicted RBP16.59■□□□□ 0.25
PCDHA1-202ENST00000394633 ARL6Q9H0F7 186 aa16.59■□□□□ 0.25
PCDHA1-202ENST00000394633 TRAV18A0A075B6X5 111 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 KIR2DS5A0A0G2JLQ3 304 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 A0A0G2JNG1 304 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 TRIM77I1YAP6 450 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 KIR2DS3K7RE56 304 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 FCER2P06734 321 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 GTF2F2P13984 249 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 AKT2P31751 481 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 NUP62P37198 522 aaPredicted RBP16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 POU3F4P49335 361 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 KIR2DS5Q14953 304 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 EMC4Q5J8M3 183 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 WDR38Q5JTN6 314 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 EEF1A1P5Q5VTE0 462 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 DEFB119Q8N690 84 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 OR6M1Q8NGM8 313 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 ATOH1Q92858 354 aaPredicted RBP16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 DCBLD2Q96PD2 775 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 DMRTA2Q96SC8 542 aa16.58■□□□□ 0.25
PCDHA1-202ENST00000394633 CACNA1CQ13936 2221 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 IGHV1OR15-9A0A0B4J2B8 117 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 TMEM272A0A1B0GTI8 110 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 RENP00797 406 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 ITGA5P08648 1049 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 FBXO45P0C2W1 286 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 AKAIN1P0CW23 69 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 CFPP27918 469 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 RASGEF1BQ0VAM2 473 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 OTPQ5XKR4 325 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 ARMC6Q6NXE6 501 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 INTS14Q96SY0 518 aa16.58■□□□□ 0.24
PCDHA1-202ENST00000394633 MNTQ99583 582 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms