RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 BEX5Q5H9J7 111 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 CLEC1AQ8NC01 280 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 OR4K14Q8NGD5 310 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 KLK6Q92876 244 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 CNRIP1Q96F85 164 aaPredicted RBP17.15■□□□□ 0.34
HOXC6-202ENST00000394331 POTEKPQ9BYX7 375 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 LAT2Q9GZY6 243 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 OR51V1Q9H2C8 321 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 GFOD1Q9NXC2 390 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 SIDT1Q9NXL6 827 aaKnown RBP17.15■□□□□ 0.34
HOXC6-202ENST00000394331 CACFD1Q9UGQ2 172 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 ZNF223Q9UK11 482 aaPredicted RBP17.15■□□□□ 0.34
HOXC6-202ENST00000394331 KPTNQ9Y664 436 aa17.15■□□□□ 0.34
HOXC6-202ENST00000394331 COL4A3Q01955 1670 aa17.14■□□□□ 0.34
HOXC6-202ENST00000394331 OIP5O43482 229 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 GTF2F2P13984 249 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 CD34P28906 385 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 TSFMP43897 325 aaKnown RBP17.14■□□□□ 0.33
HOXC6-202ENST00000394331 OR52E1Q8NGJ3 308 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 MCHR1Q99705 422 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 C2orf88Q9BSF0 95 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 GDE1Q9NZC3 331 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 AIFM1O95831 613 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 ACKR3P25106 362 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 MAS1LP35410 378 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 SLC16A1P53985 500 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 AIMP2Q13155 320 aaKnown RBP17.14■□□□□ 0.33
HOXC6-202ENST00000394331 GGTLC2Q14390 218 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 SLC48A1Q6P1K1 146 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 ARL6IP6Q8N6S5 226 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 NEU1Q99519 415 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 SMAD5Q99717 465 aaKnown RBP17.14■□□□□ 0.33
HOXC6-202ENST00000394331 SLC25A18Q9H1K4 315 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 TRPV4Q9HBA0 871 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 TRBV6-7A0A0A0MS04 114 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 FAM157AC9JC47 383 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 FRS3O43559 492 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 LATO43561 262 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 PRICKLE3O43900 615 aaPredicted RBP17.14■□□□□ 0.33
HOXC6-202ENST00000394331 HOXB5P09067 269 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 HOXA5P20719 270 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 EDNRAP25101 427 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 ATP1B3P54709 279 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 CLDN12P56749 244 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 SGCGQ13326 291 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 PYY3Q5JQD4 70 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 STEAP1BQ6NZ63 245 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 HMGN2P46Q86SG4 172 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 LRRTM1Q86UE6 522 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 ZNF433Q8N7K0 673 aaPredicted RBP17.14■□□□□ 0.33
HOXC6-202ENST00000394331 OR2L3Q8NG85 312 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 OR10H5Q8NGA6 315 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 MEPEQ9NQ76 525 aaPredicted RBP17.14■□□□□ 0.33
HOXC6-202ENST00000394331 ZNF281Q9Y2X9 895 aa17.14■□□□□ 0.33
HOXC6-202ENST00000394331 BCAT2O15382 392 aaPredicted RBP17.13■□□□□ 0.33
HOXC6-202ENST00000394331 STATHP02808 62 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 WASP42768 502 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 PRKXP51817 358 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 ANKRD16Q6P6B7 361 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 SLAMF9Q96A28 289 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 MACROD1Q9BQ69 325 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 SLITRK2Q9H156 845 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 CES1P1Q9UKY3 287 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 ICAM5Q9UMF0 924 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 YBX2Q9Y2T7 364 aaKnown RBP17.13■□□□□ 0.33
HOXC6-202ENST00000394331 NUMA1Q14980 2115 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 LY86O95711 162 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 ATXN8OSP0DMR3 200 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 F3P13726 295 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 CFPP27918 469 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 TGM3Q08188 693 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 VITQ6UXI7 678 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 UNQ6126/PRO20091Q6UXV3 157 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 TMPRSS11FQ6ZWK6 438 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 GALNT16Q8N428 558 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 C16orf58Q96GQ5 468 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 LRFN5Q96NI6 719 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 OR5B2Q96R09 309 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 PRDM13Q9H4Q3 707 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 SLC17A4Q9Y2C5 497 aa17.13■□□□□ 0.33
HOXC6-202ENST00000394331 TRPM6Q9BX84 2022 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 A0A1W2PP55 124 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 C4orf51C9J302 202 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 CEACAM5P06731 702 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 HIST1H1BP16401 226 aaKnown RBP17.12■□□□□ 0.33
HOXC6-202ENST00000394331 CMPK1P30085 196 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 SLC6A9P48067 706 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 ACTBP60709 375 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 ACTG1P63261 375 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 CHAF1BQ13112 559 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 DHRS2Q13268 280 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 ZNF750Q32MQ0 723 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 ATPAF1Q5TC12 328 aaPredicted RBP17.12■□□□□ 0.33
HOXC6-202ENST00000394331 VRK2Q86Y07 508 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 AKR7LQ8NHP1 331 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 OR7D2Q96RA2 312 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 TWSG1Q9GZX9 223 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 SERGEFQ9UGK8 458 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 FAM96BQ9Y3D0 163 aa17.12■□□□□ 0.33
HOXC6-202ENST00000394331 TMEM184BQ9Y519 407 aaPredicted RBP17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms