RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 LNP1A1A4G5 178 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 C9J4A7 227 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 NPIPA5E9PKD4 350 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 RAMP1O60894 148 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 TRIM3O75382 744 aaPredicted RBP13.51□□□□□ -0.25
GPC3-202ENST00000394299 CCL3P10147 92 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 ADRA2CP18825 462 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 SUMO3P55854 103 aaPredicted RBP13.51□□□□□ -0.25
GPC3-202ENST00000394299 HSF1Q00613 529 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 WDR38Q5JTN6 314 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 AKAP14Q86UN6 197 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 RAB43Q86YS6 212 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 ZNF676Q8N7Q3 588 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 ZBTB8BQ8NAP8 495 aaPredicted RBP13.51□□□□□ -0.25
GPC3-202ENST00000394299 ZBTB44Q8NCP5 570 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 LGALS14Q8TCE9 139 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 ZFP3Q96NJ6 502 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 GNRHR2Q96P88 292 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 CHST11Q9NPF2 352 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 NLKQ9UBE8 527 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 POU2F3Q9UKI9 436 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 NPIPA1Q9UND3 350 aa13.51□□□□□ -0.25
GPC3-202ENST00000394299 TRAV8-7A0A075B6U6 113 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 A0A0B4J293 547 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 EEF1E1O43324 174 aaKnown RBP13.5□□□□□ -0.25
GPC3-202ENST00000394299 IGHMP01871 453 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 SDHBP21912 280 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 PITPNBP48739 271 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 EIF2B1Q14232 305 aaKnown RBP13.5□□□□□ -0.25
GPC3-202ENST00000394299 AGAP6Q5VW22 663 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 OR7E24Q6IFN5 339 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 CORO6Q6QEF8 472 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 SERPINA12Q8IW75 414 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 OR2Y1Q8NGV0 311 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 ZNF671Q8TAW3 534 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 SLC39A7Q92504 469 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 AGAP4Q96P64 663 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 OR5B2Q96R09 309 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 THAP7Q9BT49 309 aaPredicted RBP13.5□□□□□ -0.25
GPC3-202ENST00000394299 ABHD6Q9BV23 337 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 ZNF700Q9H0M5 742 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 B3GAT1Q9P2W7 334 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 NXT1Q9UKK6 140 aaKnown RBP13.5□□□□□ -0.25
GPC3-202ENST00000394299 MEIOCA2RUB1 952 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 H0YC42 278 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 ZNF208O43345 1280 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 HLA-DQB1P01920 261 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 MAS1P04201 325 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 TALDO1P37837 337 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 BIDP55957 195 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 EGR3Q06889 387 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 MFGE8Q08431 387 aaPredicted RBP13.5□□□□□ -0.25
GPC3-202ENST00000394299 RIN1Q13671 783 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 SLC17A1Q14916 467 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 STAC2Q6ZMT1 411 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 TIPARPQ7Z3E1 657 aaKnown RBP13.5□□□□□ -0.25
GPC3-202ENST00000394299 GPAT4Q86UL3 456 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 GCDHQ92947 438 aaPredicted RBP13.5□□□□□ -0.25
GPC3-202ENST00000394299 MRGPRX4Q96LA9 322 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 OR8B4Q96RC9 309 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 KCNJ15Q99712 375 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 SERINC1Q9NRX5 453 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 FBXL3Q9UKT7 428 aa13.5□□□□□ -0.25
GPC3-202ENST00000394299 LYRM1O43325 122 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 STK17BO94768 372 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 ACP1P24666 158 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 MAP2K3P46734 347 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 ZP4Q12836 540 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 TMEM176BQ3YBM2 270 aaPredicted RBP13.49□□□□□ -0.25
GPC3-202ENST00000394299 Q499Y3 187 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 C5orf46Q6UWT4 87 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 SCAIQ8N9R8 606 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 OR4K17Q8NGC6 315 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 ENKURQ8TC29 256 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 JSRP1Q96MG2 331 aaPredicted RBP13.49□□□□□ -0.25
GPC3-202ENST00000394299 KCNK17Q96T54 332 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 CMKLR1Q99788 373 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 PROK2Q9HC23 129 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 SDHAF3Q9NRP4 125 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 TMEM14AQ9Y6G1 99 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 IGLV3-32A0A0A0MS00 114 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 IFITM5A6NNB3 132 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 ETV2O00321 342 aaPredicted RBP13.49□□□□□ -0.25
GPC3-202ENST00000394299 SLC43A1O75387 559 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 CD3GP09693 182 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 MSX1P28360 303 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 OTX2P32243 289 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 INPP1P49441 399 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 AGFG1P52594 562 aaKnown RBP13.49□□□□□ -0.25
GPC3-202ENST00000394299 ANGPT1Q15389 498 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 FCRLAQ7L513 359 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 CMTM4Q8IZR5 234 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 C4orf45Q96LM5 186 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 DCBLD2Q96PD2 775 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 LOXL2Q9Y4K0 774 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 R4GN57 208 aa13.49□□□□□ -0.25
GPC3-202ENST00000394299 TTC28Q96AY4 2481 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 AHCTF1Q8WYP5 2266 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 KNTC1P50748 2209 aa13.48□□□□□ -0.25
GPC3-202ENST00000394299 NSG1A0A0A6YYJ2 146 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms