RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 GNMTQ14749 295 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 ZNF468Q5VIY5 522 aaPredicted RBP8.32□□□□□ -1.08
CDH11-202ENST00000394156 OPN5Q6U736 354 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 C1orf210Q8IVY1 113 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 AKR7LQ8NHP1 331 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 CRISPLD2Q9H0B8 497 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 KLHL42Q9P2K6 505 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 ASH2LQ9UBL3 628 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 CCL4P13236 92 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 SRMP19623 302 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 BLVRBP30043 206 aaPredicted RBP8.32□□□□□ -1.08
CDH11-202ENST00000394156 BDH1Q02338 343 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 SF3B4Q15427 424 aaKnown RBP eCLIP8.32□□□□□ -1.08
CDH11-202ENST00000394156 TOMM34Q15785 309 aaPredicted RBP8.32□□□□□ -1.08
CDH11-202ENST00000394156 STEAP3Q658P3 488 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 ZNF813Q6ZN06 617 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 STOML3Q8TAV4 291 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 ITGB1BP2Q9UKP3 347 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 HSPE1-MOB4S4R3N1 261 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 BRWD1Q9NSI6 2320 aa8.32□□□□□ -1.08
CDH11-202ENST00000394156 TRBV5-4A0A0C4DH59 114 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 GRXCR2A6NFK2 248 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 H0YJX3 145 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 MPPED1O15442 326 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 SOX15O60248 233 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 MOSPD3O75425 235 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 FBXO24O75426 580 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 OR52W1Q6IF63 320 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 SFXN4Q6P4A7 337 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 SYT13Q7L8C5 426 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 PXKQ7Z7A4 578 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 TMEM217Q8N7C4 229 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 FAM71CQ8NEG0 241 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 KCND3Q9UK17 655 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 COPS3Q9UNS2 423 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 FLVCR2Q9UPI3 526 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 MEIOCA2RUB1 952 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 TTLL8A6PVC2 850 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 DIRAS3O95661 229 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 HLA-AP01891 365 aaKnown RBP8.31□□□□□ -1.08
CDH11-202ENST00000394156 B4GALT1P15291 398 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 DMWDQ09019 674 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 TM9SF4Q92544 642 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 SCGB3A2Q96PL1 93 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 ALKBH3Q96Q83 286 aaPredicted RBP8.31□□□□□ -1.08
CDH11-202ENST00000394156 UBQLN2Q9UHD9 624 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 TRAPPC2LQ9UL33 140 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 A0A0G2JMP0 313 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 METTL12A8MUP2 240 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 NPY4RP50391 375 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 SORDQ00796 357 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 MLLT11Q13015 90 aaPredicted RBP8.31□□□□□ -1.08
CDH11-202ENST00000394156 SFRP5Q5T4F7 317 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 RPS19BP1Q86WX3 136 aaKnown RBP8.31□□□□□ -1.08
CDH11-202ENST00000394156 OR4M2Q8NGB6 313 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 OR2T35Q8NGX2 323 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 NANOS1Q8WY41 292 aaKnown RBP8.31□□□□□ -1.08
CDH11-202ENST00000394156 C7orf50Q9BRJ6 194 aaKnown RBP8.31□□□□□ -1.08
CDH11-202ENST00000394156 SEC22CQ9BRL7 303 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 ADAM29Q9UKF5 820 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 PCDHB10Q9UN67 800 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 TRAPPC2LH3BP13 241 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 SPRY1O43609 319 aaPredicted RBP8.31□□□□□ -1.08
CDH11-202ENST00000394156 CHP2O43745 196 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 ZNF205O95201 554 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 GPX2P18283 190 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 ABCD3P28288 659 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 PRKAR1BP31321 381 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 P2RX1P51575 399 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 TATDN3Q17R31 274 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 PWWP2BQ6NUJ5 590 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 SSX9Q7RTT3 188 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 COMMD7Q86VX2 200 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 ZNF709Q8N972 641 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 POFUT1Q9H488 388 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 GPATCH2Q9NW75 528 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 KCNIP1Q9NZI2 227 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 PLEKHB1Q9UF11 243 aaPredicted RBP8.31□□□□□ -1.08
CDH11-202ENST00000394156 STMND1H3BQB6 276 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 TNFRSF10AO00220 468 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 CXCL13O43927 109 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 HTR1FP30939 366 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 TAGLNQ01995 201 aaKnown RBP8.31□□□□□ -1.08
CDH11-202ENST00000394156 FOXF1Q12946 379 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 ALKBH1Q13686 389 aaKnown RBP8.31□□□□□ -1.08
CDH11-202ENST00000394156 KRBOX4Q5JUW0 171 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 USP51Q70EK9 711 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 C20orf196Q8IYI0 205 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 CPT1CQ8TCG5 803 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 LYSMD1Q96S90 227 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 TEAD3Q99594 435 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 PIGQQ9BRB3 760 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 TMEM38AQ9H6F2 299 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 CABIN1Q9Y6J0 2220 aa8.31□□□□□ -1.08
CDH11-202ENST00000394156 SDCBPO00560 298 aaPredicted RBP8.3□□□□□ -1.08
CDH11-202ENST00000394156 EIF2DP41214 584 aaKnown RBP8.3□□□□□ -1.08
CDH11-202ENST00000394156 RNF4P78317 190 aa8.3□□□□□ -1.08
CDH11-202ENST00000394156 ACKR1Q16570 336 aa8.3□□□□□ -1.08
CDH11-202ENST00000394156 SLC35F3Q8IY50 421 aa8.3□□□□□ -1.08
CDH11-202ENST00000394156 ZNF679Q8IYX0 411 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms