RNA–Protein interactions for RNA: ENST00000392246.6

SUMO1-203, Transcript of small ubiquitin-like modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMO1, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-203ENST00000392246 SLC2A10O95528 541 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 IFNGP01579 166 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 HMGN1P05114 100 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 HOXB1P14653 301 aaPredicted RBP13.08□□□□□ -0.31
SUMO1-203ENST00000392246 COX6B1P14854 86 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 HOXC12P31275 282 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 RAD23AP54725 363 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 PTGES3Q15185 160 aaKnown RBP13.08□□□□□ -0.31
SUMO1-203ENST00000392246 TRIP10Q15642 601 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 C1QTNF12Q5T7M4 302 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 ACSM5Q6NUN0 579 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 ZNF627Q7L945 461 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 SSX8Q7RTT4 187 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 NPEPL1Q8NDH3 523 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 SDR9C7Q8NEX9 313 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 FAM222BQ8WU58 562 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 NSMAFQ92636 917 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 BCL2L2Q92843 193 aaPredicted RBP13.08□□□□□ -0.31
SUMO1-203ENST00000392246 MUCL1Q96DR8 90 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 SLC25A19Q9HC21 320 aa13.08□□□□□ -0.31
SUMO1-203ENST00000392246 A0A096LPE4 126 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 A0A1W2PPZ6 126 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 EPXP11678 715 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 COL8A1P27658 744 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 CRABP1P29762 137 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 GUCA1AP43080 201 aaPredicted RBP13.08□□□□□ -0.32
SUMO1-203ENST00000392246 NPRL3Q12980 569 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 TAB1Q15750 504 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 TBRG1Q3YBR2 411 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 HIKESHIQ53FT3 197 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 ZNF362Q5T0B9 420 aaPredicted RBP13.08□□□□□ -0.32
SUMO1-203ENST00000392246 ZNF813Q6ZN06 617 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 C22orf34Q6ZV56 151 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 ZC3HAV1LQ96H79 300 aaKnown RBP13.08□□□□□ -0.32
SUMO1-203ENST00000392246 SLC29A1Q99808 456 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 GABARAPL3Q9BY60 117 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 SLC17A5Q9NRA2 495 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 CMC2Q9NRP2 79 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 TMEM38BQ9NVV0 291 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 ZNF226Q9NYT6 803 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 CRIM1Q9NZV1 1036 aa13.08□□□□□ -0.32
SUMO1-203ENST00000392246 PKDREJQ9NTG1 2253 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 PRR14LQ5THK1 2151 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 OR6C68A6NDL8 312 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 RIIAD1A6NNX1 92 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 CASKO14936 926 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 SLC16A7O60669 478 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 KHDRBS3O75525 346 aaKnown RBP13.07□□□□□ -0.32
SUMO1-203ENST00000392246 SEC14L2O76054 403 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 B4GALT1P15291 398 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 CTLA4P16410 223 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 ZNF3P17036 446 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 NPR2P20594 1047 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 UBE2NP61088 152 aaKnown RBP13.07□□□□□ -0.32
SUMO1-203ENST00000392246 PPA1Q15181 289 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 NRN1LQ496H8 165 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 TMEM236Q5W0B7 351 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 DNM1P34Q6PK57 102 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 KLHL24Q6TFL4 600 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 CCDC36Q8IYA8 594 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 WDR31Q8NA23 367 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 SLC37A3Q8NCC5 494 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 OR52N5Q8NH56 324 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 DDOQ99489 341 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 NUAK2Q9H093 628 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 NELFAQ9H3P2 528 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 RIBC2Q9H4K1 309 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 RNPEPL1Q9HAU8 725 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 OBP2BQ9NPH6 170 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 RPRD1BQ9NQG5 326 aaKnown RBP13.07□□□□□ -0.32
SUMO1-203ENST00000392246 C8orf4Q9NR00 106 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 KCNN3Q9UGI6 736 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 AMDHD2Q9Y303 409 aa13.07□□□□□ -0.32
SUMO1-203ENST00000392246 ZAR1LA6NP61 321 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 CASQ2O14958 399 aaPredicted RBP13.06□□□□□ -0.32
SUMO1-203ENST00000392246 MGRN1O60291 552 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 FARS2O95363 451 aaKnown RBP13.06□□□□□ -0.32
SUMO1-203ENST00000392246 WNT11O96014 354 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 THBDP07204 575 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 OR8G3PP0DMU2 310 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 PAX7P23759 505 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 EPHA2P29317 976 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 MRPS34P82930 218 aaKnown RBP13.06□□□□□ -0.32
SUMO1-203ENST00000392246 SLC34A1Q06495 639 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 ETFDHQ16134 617 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 LRRC36Q1X8D7 754 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 LPCAT4Q643R3 524 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 SLC22A24Q8N4F4 322 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 CYB561A3Q8NBI2 242 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 TSSK2Q96PF2 358 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 SLC38A2Q96QD8 506 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 PRRG3Q9BZD7 231 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 RERGLQ9H628 205 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 SEC61A2Q9H9S3 476 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 SRA1Q9HD15 236 aaKnown RBP13.06□□□□□ -0.32
SUMO1-203ENST00000392246 NKX1-2Q9UD57 310 aaPredicted RBP13.06□□□□□ -0.32
SUMO1-203ENST00000392246 B9D1Q9UPM9 204 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 UGT2A1Q9Y4X1 527 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 SLC25A15Q9Y619 301 aa13.06□□□□□ -0.32
SUMO1-203ENST00000392246 FKBP7Q9Y680 259 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms