RNA–Protein interactions for RNA: ENST00000390484.1

TRAJ54-201, Transcript of T cell receptor alpha joining 54, humanhuman

APPRIS P1 BASIC

Gene TRAJ54, Length 60 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ54-201ENST00000390484 TMEM68Q96MH6 324 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TCEANC2Q96MN5 208 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF488Q96MN9 340 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CFAP57Q96MR6 1250 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RNF145Q96MT1 663 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 COG8Q96MW5 612 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CMTM3Q96MX0 182 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 C7orf26Q96N11 449 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF75AQ96N20 296 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF558Q96NG5 402 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF570Q96NI8 536 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 AMDHD1Q96NU7 426 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BIRC8Q96P09 236 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 QRFPRQ96P65 431 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TSSK2Q96PF2 358 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MS4A4EQ96PG1 132 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DEFB118Q96PH6 123 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RBM14Q96PK6 669 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ERMAPQ96PL5 475 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TSSK3Q96PN8 268 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TSGA13Q96PP4 275 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GBP5Q96PP8 586 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 QKIQ96PU8 341 aaKnown RBP eCLIP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ODF3Q96PU9 254 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CSPG4P5Q96PW8 444 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DERL3Q96Q80 235 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GCNAQ96QF7 691 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TSPAN32Q96QS1 320 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PSKH2Q96QS6 385 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PANX3Q96QZ0 392 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR2M2Q96R28 347 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR2A5Q96R48 311 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR4K3Q96R72 315 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 OR8B2Q96RD0 313 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PANX2Q96RD6 677 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 BBS4Q96RK4 519 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TGS1Q96RS0 853 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 USP28Q96RU2 1077 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TRIB3Q96RU7 358 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RPS6KC1Q96S38 1066 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PIGSQ96S52 555 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ZNF382Q96SR6 550 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 INTS14Q96SY0 518 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SECISBP2Q96T21 854 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PSMB7Q99436 277 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ATP6V0BQ99437 205 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PSMD1Q99460 953 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NPY6RQ99463 290 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CD180Q99467 661 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 STACQ99469 402 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PAFAH2Q99487 392 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PARK7Q99497 189 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 S1PR3Q99500 378 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LGMNQ99538 433 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 P2RX4Q99571 388 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 EIF3CQ99613 913 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PRPF18Q99633 342 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LPAR4Q99677 370 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GPR21Q99679 349 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 DOK1Q99704 481 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RBBP8Q99708 897 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CCL19Q99731 98 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CDC6Q99741 560 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TXN2Q99757 166 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GPA33Q99795 319 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NKX3-1Q99801 234 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CCT7Q99832 543 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SSX3Q99909 188 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 GABRG3Q99928 467 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 AGPAT1Q99943 283 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 P2RY13Q9BPV8 354 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NCAPGQ9BPX3 1015 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KCTD14Q9BQ13 255 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PDCD1LG2Q9BQ51 273 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 ELAC2Q9BQ52 826 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 C19orf43Q9BQ61 176 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 KXD1Q9BQD3 176 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 SELENOSQ9BQE4 189 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TMEM47Q9BQJ4 181 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 C20orf144Q9BQM9 153 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MGME1Q9BQP7 344 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PRSS27Q9BQR3 290 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RHOXF2Q9BQY4 288 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TXNDC17Q9BRA2 123 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 MRPL45Q9BRJ2 306 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TM2D3Q9BRN9 247 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PYM1Q9BRP8 204 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 Q9BRP9 147 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 C11orf70Q9BRQ4 267 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 TMEM246Q9BRR3 403 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 RIOK1Q9BRS2 568 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CBWD1Q9BRT8 395 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 UTP23Q9BRU9 249 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PELOQ9BRX2 385 aaKnown RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NIPSNAP3BQ9BS92 247 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 PCGF1Q9BSM1 259 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 NAA11Q9BSU3 229 aaPredicted RBP-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 CNPY3Q9BT09 278 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 LIMD2Q9BT23 127 aa-0.09□□□□□ -2.42
TRAJ54-201ENST00000390484 INPP5KQ9BT40 448 aa-0.09□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms