RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 WDFY3Q8IZQ1 3526 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 DOCK10Q96BY6 2186 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 PCSK5Q92824 1860 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 TERTO14746 1132 aaKnown RBP22.56■■□□□ 1.2
SHOX2-201ENST00000389589 KHDRBS3O75525 346 aaKnown RBP22.56■■□□□ 1.2
SHOX2-201ENST00000389589 SPARCP09486 303 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 SFTPDP35247 375 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 RPS27P42677 84 aaKnown RBP22.56■■□□□ 1.2
SHOX2-201ENST00000389589 P2RY4P51582 365 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 BIDP55957 195 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 CDC20Q12834 499 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 HSD17B12Q53GQ0 312 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 KCTD18Q6PI47 426 aaPredicted RBP22.56■■□□□ 1.2
SHOX2-201ENST00000389589 OR5AK2Q8NH90 309 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 NSMAFQ92636 917 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 PPP1R14BQ96C90 147 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 MAP6Q96JE9 813 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 JSRP1Q96MG2 331 aaPredicted RBP22.56■■□□□ 1.2
SHOX2-201ENST00000389589 UBL7Q96S82 380 aaPredicted RBP22.56■■□□□ 1.2
SHOX2-201ENST00000389589 B3GNT4Q9C0J1 378 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 KNTC1P50748 2209 aa22.56■■□□□ 1.2
SHOX2-201ENST00000389589 SULT2B1O00204 365 aa22.55■■□□□ 1.2
SHOX2-201ENST00000389589 PMS2P2O95744 297 aa22.55■■□□□ 1.2
SHOX2-201ENST00000389589 OPN1LWP04000 364 aa22.55■■□□□ 1.2
SHOX2-201ENST00000389589 JMJD6Q6NYC1 403 aaPredicted RBP22.55■■□□□ 1.2
SHOX2-201ENST00000389589 TMPPEQ6ZT21 453 aa22.55■■□□□ 1.2
SHOX2-201ENST00000389589 MDGA2Q7Z553 956 aa22.55■■□□□ 1.2
SHOX2-201ENST00000389589 GLRX5Q86SX6 157 aa22.55■■□□□ 1.2
SHOX2-201ENST00000389589 OXGR1Q96P68 337 aa22.55■■□□□ 1.2
SHOX2-201ENST00000389589 SLCO1C1Q9NYB5 712 aa22.55■■□□□ 1.2
SHOX2-201ENST00000389589 KLHL13Q9P2N7 655 aa22.55■■□□□ 1.2
SHOX2-201ENST00000389589 A0A0G2JK05 382 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 LOC102725191A0A1B0GVB3 256 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 ZNF432O94892 652 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 PSKH1P11801 424 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 EVX1P49640 407 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 ROM1Q03395 351 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 B3GNTL1Q67FW5 361 aaPredicted RBP22.54■■□□□ 1.2
SHOX2-201ENST00000389589 FDX2Q6P4F2 183 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 PIP4P1Q86T03 277 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 ZNF679Q8IYX0 411 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 FOXN4Q96NZ1 517 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 RBP7Q96R05 134 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 FRRS1LQ9P0K9 344 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 CACNA1HO95180 2353 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 G3V3Y1 287 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 ZIC3O60481 467 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 RAD1O60671 282 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 TMCC2O75069 709 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 ZNF823P16415 610 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 RASGEF1BQ0VAM2 473 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 RAET1LQ5VY80 246 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 TMEM225Q6GV28 225 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 CNIH2Q6PI25 160 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 SLC26A10Q8NG04 563 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 SETD6Q8TBK2 473 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 HSD17B8Q92506 261 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 C14orf119Q9NWQ9 140 aa22.54■■□□□ 1.2
SHOX2-201ENST00000389589 AQP7P3A6NL99 342 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 TNFSF15O95150 251 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 MAPK3P27361 379 aaPredicted RBP22.53■■□□□ 1.2
SHOX2-201ENST00000389589 SLC17A1Q14916 467 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 MEP1BQ16820 701 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 TEX30Q5JUR7 227 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 OR2G2Q8NGZ5 317 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 AMELYQ99218 206 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 SOSTQ9BQB4 213 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 COMMD4Q9H0A8 199 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 ZCCHC4Q9H5U6 513 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 ELOVL3Q9HB03 270 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 KLHL9Q9P2J3 617 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 ING1Q9UK53 422 aaPredicted RBP22.53■■□□□ 1.2
SHOX2-201ENST00000389589 TMEM212A6NML5 194 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 NOTOA8MTQ0 251 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 HRGP04196 525 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 THBS2P35442 1172 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 OR10A3P58181 314 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 PIGQQ9BRB3 760 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 MRPL13Q9BYD1 178 aaKnown RBP22.53■■□□□ 1.2
SHOX2-201ENST00000389589 RASD1Q9Y272 281 aa22.53■■□□□ 1.2
SHOX2-201ENST00000389589 A0A1W2PPK0 400 aa22.52■■□□□ 1.2
SHOX2-201ENST00000389589 FUOMA2VDF0 154 aa22.52■■□□□ 1.2
SHOX2-201ENST00000389589 OR2M5A3KFT3 312 aa22.52■■□□□ 1.2
SHOX2-201ENST00000389589 LRP3O75074 770 aa22.52■■□□□ 1.2
SHOX2-201ENST00000389589 BCAP31P51572 246 aa22.52■■□□□ 1.2
SHOX2-201ENST00000389589 FMODQ06828 376 aa22.52■■□□□ 1.2
SHOX2-201ENST00000389589 EIF2B1Q14232 305 aaKnown RBP22.52■■□□□ 1.2
SHOX2-201ENST00000389589 THEM4Q5T1C6 240 aa22.52■■□□□ 1.2
SHOX2-201ENST00000389589 LRRC69Q6ZNQ3 347 aa22.52■■□□□ 1.2
SHOX2-201ENST00000389589 ZSCAN2Q7Z7L9 614 aaPredicted RBP22.52■■□□□ 1.2
SHOX2-201ENST00000389589 RGP1Q92546 391 aaPredicted RBP22.52■■□□□ 1.2
SHOX2-201ENST00000389589 DCBLD2Q96PD2 775 aa22.52■■□□□ 1.2
SHOX2-201ENST00000389589 NOX4Q9NPH5 578 aa22.52■■□□□ 1.2
SHOX2-201ENST00000389589 OR4C45A6NMZ5 311 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 STMND1H3BQB6 276 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 PDCD5O14737 125 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 TRAF3IP2O43734 574 aaPredicted RBP22.51■■□□□ 1.19
SHOX2-201ENST00000389589 AQP8O94778 261 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 IGHG1P01857 330 aa22.51■■□□□ 1.19
SHOX2-201ENST00000389589 IL7P13232 177 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms