RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 CHRDL2Q6WN34 429 aa13.49□□□□□ -0.25
SCFD2-201ENST00000388940 ZNF679Q8IYX0 411 aa13.49□□□□□ -0.25
SCFD2-201ENST00000388940 RNF128Q8TEB7 428 aa13.49□□□□□ -0.25
SCFD2-201ENST00000388940 ZNF431Q8TF32 576 aaPredicted RBP13.49□□□□□ -0.25
SCFD2-201ENST00000388940 TMEM106AQ96A25 262 aa13.49□□□□□ -0.25
SCFD2-201ENST00000388940 AMELYQ99218 206 aa13.49□□□□□ -0.25
SCFD2-201ENST00000388940 TGIF2Q9GZN2 237 aa13.49□□□□□ -0.25
SCFD2-201ENST00000388940 FBXL3Q9UKT7 428 aa13.49□□□□□ -0.25
SCFD2-201ENST00000388940 TRAV8-7A0A075B6U6 113 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 TTLL8A6PVC2 850 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 B8ZZF3 427 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 PLPP3O14495 311 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 WISP1O95388 367 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 GPANK1O95872 356 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 TAS2R20P59543 309 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 INSM1Q01101 510 aaPredicted RBP13.48□□□□□ -0.25
SCFD2-201ENST00000388940 WDR38Q5JTN6 314 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 C1orf189Q5VU69 101 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 SLC18B1Q6NT16 456 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 TMPRSS12Q86WS5 348 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 ZNF227Q86WZ6 799 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 PIAS4Q8N2W9 510 aaPredicted RBP13.48□□□□□ -0.25
SCFD2-201ENST00000388940 SLC25A45Q8N413 288 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 ZNF768Q9H5H4 540 aaKnown RBP13.48□□□□□ -0.25
SCFD2-201ENST00000388940 ELOVL3Q9HB03 270 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 FGF21Q9NSA1 209 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 UNC13CQ8NB66 2214 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 GLSO94925 669 aaPredicted RBP13.48□□□□□ -0.25
SCFD2-201ENST00000388940 GIMD1P0DJR0 217 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 RPS27P42677 84 aaKnown RBP13.48□□□□□ -0.25
SCFD2-201ENST00000388940 STARD6P59095 220 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 SFRP4Q6FHJ7 346 aaPredicted RBP13.48□□□□□ -0.25
SCFD2-201ENST00000388940 SEZ6L2Q6UXD5 910 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 PRSS58Q8IYP2 241 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 OR10AC1Q8NH08 325 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 SNAPC3Q92966 411 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 C8orf44Q96CB5 159 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 UTP23Q9BRU9 249 aaKnown RBP13.48□□□□□ -0.25
SCFD2-201ENST00000388940 MRPL22Q9NWU5 206 aaKnown RBP13.48□□□□□ -0.25
SCFD2-201ENST00000388940 MRPL15Q9P015 296 aaKnown RBP13.48□□□□□ -0.25
SCFD2-201ENST00000388940 KLK11Q9UBX7 282 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 KCNN3Q9UGI6 736 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 MGAT4AQ9UM21 535 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 EXPH5Q8NEV8 1989 aa13.48□□□□□ -0.25
SCFD2-201ENST00000388940 A0A1B0GUH1 482 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 SLC22A23A1A5C7 686 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 XRCC3O43542 346 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 SLC16A7O60669 478 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 KHDRBS3O75525 346 aaKnown RBP13.47□□□□□ -0.25
SCFD2-201ENST00000388940 OR6A2O95222 327 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 AHSA1O95433 338 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 MAS1P04201 325 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 CTRB1P17538 263 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 HTR2BP41595 481 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 SLC26A5P58743 744 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 RPS15P62841 145 aaKnown RBP13.47□□□□□ -0.25
SCFD2-201ENST00000388940 RNF4P78317 190 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 MEP1BQ16820 701 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 TMEM255AQ5JRV8 349 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 CTRB2Q6GPI1 263 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 LRRC69Q6ZNQ3 347 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 DNAAF1Q8NEP3 725 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 OR51A4Q8NGJ6 313 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 GCDHQ92947 438 aaPredicted RBP13.47□□□□□ -0.25
SCFD2-201ENST00000388940 SEMA4CQ9C0C4 833 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 UBE2ZQ9H832 354 aaPredicted RBP13.47□□□□□ -0.25
SCFD2-201ENST00000388940 SRPK3Q9UPE1 567 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 IGLV3-12A0A075B6K2 115 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 TOX3O15405 576 aaPredicted RBP13.47□□□□□ -0.25
SCFD2-201ENST00000388940 PLGP00747 810 aaPredicted RBP13.47□□□□□ -0.25
SCFD2-201ENST00000388940 HLA-DQA2P01906 255 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 MECP2P51608 486 aaKnown RBP13.47□□□□□ -0.25
SCFD2-201ENST00000388940 AFF3P51826 1226 aaKnown RBP13.47□□□□□ -0.25
SCFD2-201ENST00000388940 CAMK2DQ13557 499 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 METTL11BQ5VVY1 283 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 KCTD18Q6PI47 426 aaPredicted RBP13.47□□□□□ -0.25
SCFD2-201ENST00000388940 LANCL3Q6ZV70 420 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 COX15Q7KZN9 410 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 ZNF454Q8N9F8 522 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 DUSP19Q8WTR2 217 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 TMEM234Q8WY98 164 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 FOXQ1Q9C009 403 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 TTYH1Q9H313 450 aaPredicted RBP13.47□□□□□ -0.25
SCFD2-201ENST00000388940 SCP2D1Q9UJQ7 156 aa13.47□□□□□ -0.25
SCFD2-201ENST00000388940 ING1Q9UK53 422 aaPredicted RBP13.47□□□□□ -0.25
SCFD2-201ENST00000388940 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.46□□□□□ -0.25
SCFD2-201ENST00000388940 FTCDNL1E5RQL4 147 aa13.46□□□□□ -0.25
SCFD2-201ENST00000388940 ERVH48-1M5A8F1 160 aa13.46□□□□□ -0.25
SCFD2-201ENST00000388940 BCAT2O15382 392 aaPredicted RBP13.46□□□□□ -0.25
SCFD2-201ENST00000388940 SSNA1O43805 119 aa13.46□□□□□ -0.25
SCFD2-201ENST00000388940 HPXP02790 462 aa13.46□□□□□ -0.25
SCFD2-201ENST00000388940 CRABP1P29762 137 aa13.46□□□□□ -0.25
SCFD2-201ENST00000388940 DLX5P56178 289 aa13.46□□□□□ -0.25
SCFD2-201ENST00000388940 ZP4Q12836 540 aa13.46□□□□□ -0.25
SCFD2-201ENST00000388940 SMAD2Q15796 467 aaKnown RBP13.46□□□□□ -0.25
SCFD2-201ENST00000388940 RHBDD2Q6NTF9 364 aa13.46□□□□□ -0.25
SCFD2-201ENST00000388940 ANKRD16Q6P6B7 361 aa13.46□□□□□ -0.25
SCFD2-201ENST00000388940 SPEM1Q8N4L4 309 aa13.46□□□□□ -0.25
SCFD2-201ENST00000388940 OR11H4Q8NGC9 324 aa13.46□□□□□ -0.25
SCFD2-201ENST00000388940 MS4A3Q96HJ5 214 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms