RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 SLC25A12O75746 678 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 GP1BAP07359 652 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DUX4L2P0CJ85 424 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DUX4L3P0CJ86 424 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DUX4L4P0CJ87 422 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DUX4L5P0CJ88 424 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DUX4L6P0CJ89 424 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DUX4L7P0CJ90 424 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 VSIG10L2P0DP72 767 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 CDK2P24941 298 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 HTRA4P83105 476 aaPredicted RBP11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 ABHD13Q7L211 337 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DPY19L4Q7Z388 723 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 HAVCR2Q8TDQ0 301 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 ELP5Q8TE02 316 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 GAL3ST4Q96RP7 486 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 KIR3DX1Q9H7L2 352 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 ZFP57Q9NU63 452 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 DUX4Q9UBX2 424 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 EPHA6Q9UF33 1036 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 ATXN7L1Q9ULK2 861 aaPredicted RBP11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 KLHDC2Q9Y2U9 406 aa11.34□□□□□ -0.59
PRPF40B-202ENST00000380281 FREM3P0C091 2139 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 F5H5P2 479 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 NDUFB2O95178 105 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 CPN1P15169 458 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 ITPKBP27987 946 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 NR0B1P51843 470 aaKnown RBP11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 ART1P52961 327 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 SSTP61278 116 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 ENPP2Q13822 863 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 CBLN3Q6UW01 205 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 TAF8Q7Z7C8 310 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 OR6V1Q8N148 313 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 KDM8Q8N371 416 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF676Q8N7Q3 588 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 SMIM19Q96E16 107 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 GPN1Q9HCN4 374 aaPredicted RBP11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 MKKSQ9NPJ1 570 aaPredicted RBP11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 B4DGG1 531 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 APBB3O95704 486 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 GPX4P36969 197 aaPredicted RBP11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 PSG6Q00889 435 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 FABP9Q0Z7S8 132 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNHIT3Q15649 155 aaPredicted RBP11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 C21orf62-AS1Q17RA5 79 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 TMEM240Q5SV17 173 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 DHRS7BQ6IAN0 325 aaPredicted RBP11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 OR51D1Q8NGF3 324 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 OR6K3Q8NGY3 331 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 MOGAT1Q96PD6 335 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 TAS2R5Q9NYW4 299 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 ASH2LQ9UBL3 628 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF230Q9UIE0 474 aaPredicted RBP11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 MKL2Q9ULH7 1088 aa11.33□□□□□ -0.6
PRPF40B-202ENST00000380281 URADA6NGE7 173 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 S100A8P05109 93 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 ANXA2P07355 339 aaKnown RBP11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 ST6GAL1P15907 406 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 SPI1P17947 270 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 AKR1C3P42330 323 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 CDKN2AP42771 156 aaKnown RBP11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 DLX5P56178 289 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 CTXN1P60606 82 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 RPS11P62280 158 aaKnown RBP eCLIP11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 EIF2S3LQ2VIR3 472 aaKnown RBP11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 OR2B11Q5JQS5 317 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 LIPNQ5VXI9 398 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 OR2W3Q7Z3T1 314 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 GLB1L2Q8IW92 636 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 ZSCAN1Q8NBB4 408 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 TNFAIP8L1Q8WVP5 186 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 FCAMRQ8WWV6 532 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 RSRP1Q9BUV0 290 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 JAM3Q9BX67 310 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 ZNF471Q9BX82 626 aaPredicted RBP11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 CDV3Q9UKY7 258 aaKnown RBP11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 CAMK2AQ9UQM7 478 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 A0A0B4J2E0 115 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 A0A1B0GX12 115 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 OIP5O43482 229 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 BRINP1O60477 761 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 KRT33AO76009 404 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 AQP8O94778 261 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 FARS2O95363 451 aaKnown RBP11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 ATP1B1P05026 303 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 PBX2P40425 430 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 PTH2RP49190 550 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 GMFBP60983 142 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 RAB5BP61020 215 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 ACSM1Q08AH1 577 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 RIPPLY1Q0D2K3 151 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 PRICKLE4Q2TBC4 344 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 PCGF3Q3KNV8 242 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 PRAMEF17Q5VTA0 474 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 OR10K2Q6IF99 312 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 RAB12Q6IQ22 244 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 TMPRSS11FQ6ZWK6 438 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 TPRA1Q86W33 373 aa11.32□□□□□ -0.6
PRPF40B-202ENST00000380281 RHOVQ96L33 236 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms